getSplicingEventFromGenes {psichomics} | R Documentation

## Retrieve alternative splicing events based on given genes

### Description

Retrieve alternative splicing events based on given genes

### Usage

    getSplicingEventFromGenes(genes, ASevents)

### Arguments

`genes` | Character: gene symbols (or TCGA-styled gene symbols)
`ASevents` | Character: alternative splicing events to be matched

### Value

Character containing respective alternative splicing events

### Examples

    ASevents <- c("SE_1_+_201763003_201763300_201763374_201763594_NAV1",
                  "SE_1_+_183515472_183516238_183516387_183518343_SMG7",
                  "SE_1_+_183441784_183471388_183471526_183481972_SMG7",
                  "SE_1_+_181019422_181022709_181022813_181024361_MR1",
                  "SE_1_+_181695298_181700311_181700367_181701520_CACNA1E")
    genes <- c("NAV1", "SMG7", "MR1", "HELLO")
    getSplicingEventFromGenes(genes, ASevents)

[Package psichomics version 1.6.2 Index]