gseaSignificanceVar-class {phenoTest} | R Documentation

## Class "gseaSignificanceVar"

### Description

This object contains the results of the test of enrichment that was performed on each gene set and phenotype. There is one container for every phenotype. Every one of this containers (of class `gseaSignificanceSign`) is a container itsef and has the results of the tests for all signatures. `GseaSignificanceVar` contains one element per phenotype (phenotypic variable). Every one of this elements is of class `gseaSignificanceSign` and contains one element per signature.

### Objects from the Class

Objects can be created by calls of the form `new("gseaSignificanceVar", ...)`.

### Slots

`.Data`:

  Object of class `"list"` .

`gseaSignificance`:

  Object of class `"gseaSignificanceSign"` This object contains the results of the tests.

### Extends

Class `"list"`, from data part. Class `"vector"`, by class "list", distance 2. Class `"AssayData"`, by class "list", distance 2.

### Methods

No methods defined with class "gseaSignificanceVar" in the signature.

### Author(s)

Evarist Planet

### Examples

    showClass("gseaSignificanceVar")

[Package phenoTest version 1.28.0 Index]