oppar {oppar} | R Documentation

## oppar: A package for outlier profile and pathway analysis.

### Description

The oppar package provides 3 main function for outlier profile analysis: opa, getSampleOutlier and getSubtypeProbes, and 1 function for pathway and gene set enrichment analysis, based on gsva function implemented in the GSVA package

### opa

calculates the outlier profile matrix, using the method proposed in Wang et al. (2012) paper

### getSampleOutlier

extracts outlier profile for individual samples

### getSubtypeProbes

extracts outlier profile for a group of related samples, such as subtypes

[Package oppar version 1.8.0 Index]