nucleosome_htseq {nucleR} | R Documentation

## Example reads from high-troughtput sequencing nucleosome positioning experiment

### Description

Few reads from paired-ended MNase-seq experiment in S.cerevisiae where mononucleosomes were sequenced

### Format

`GRanges` with the range of the reads and a data column with the strand information.

### Details

This data is obtained from MNase digested nucleosomal DNA and sequenced with Illumina platform. Paired-ended reads where mapped to SacCer1 genome using Bowtie, and imported to R using the package `ShortRead` and paired ends where merged into a single range.

Reads were sorted by chromosome and starting position and only a few reads from the starting positions of chromosome 1 are presented.

### Source

Publication pending

[Package nucleR version 2.12.1 Index]