checkMiRNAAlive {miRBaseConverter} | R Documentation

## Check the miRNA status(Alive or Dead)

### Description

This function checks the miRNA status (Alive or Dead) in the latest miRBase version.

### Usage

    checkMiRNAAlive(Accessions, verbose = TRUE)

### Arguments

`Accessions` | A character vector representing the miRNA Accessions in miRBase.
`verbose` | Logical value. If true, the dead miRNAs will be printed the console.

### Value

A character vector of Accessions for all alive miRNAs. The names of the return vector are the position indexes in the input Accessions.

### Author(s)

Xu, Taosheng taosheng.x@gmail.com

### Examples

    data(miRNATest)
    ## The input is miRNA Accessions
    Accessions=miRNATest$Accession
    alive_Accession1=checkMiRNAAlive(Accessions)

    ##The input is miRNA names
    miRNANames=miRNATest$miRNA_Name
    version=checkMiRNAVersion(miRNANames,verbose = TRUE)
    result=miRNA_NameToAccession(miRNANames,version = version)
    Accessions=result$Accession
    alive_Accession2=checkMiRNAAlive(Accessions)

[Package miRBaseConverter version 1.4.3 Index]