summary_mQTL {mQTL.NMR} | R Documentation

## Function to summarize the mQTL mapping results of all the runs and their differences

### Description

This function generates a table containing the genetic markers and thier associated metabolomic variables and estimated LOD score.

### Usage

    summary_mQTL(results, redfile,Th = 5)

### Arguments

`results` | a list sepcifying the mQTL mapping results
`redfile` | a text file containing the parameters of identified clusters(.PPM file)
`Th` | a numerical paramater indicating the threshold of top accepted score (LOD or -log10(p-value))

### Details

Generates a text file containing a table of summary of mQTL mapping results

### Value

returns Summaries

### Author(s)

Jean-Baptiste Cazier and Lyamine Hedjazi

### See Also

`pre_mQTL`

### Examples

        load_datafiles()
        load(results)

        Th<-10 ## LOD threshold
        summary_mQTL(results,rectangle_SRV,Th)## summarizes mQTL results in a table

[Package mQTL.NMR version 1.14.0 Index]