convertIdentifiers {graphite} | R Documentation

## Convert the node identifiers of a pathway.

### Description

Converts the node identifiers of pathways.

If the option `Ncpus` is set to a value larger than 1 and the package `parallel` is installed, the conversion procedure will automatically use multiple cores.

### Usage

    convertIdentifiers(x, to)

### Arguments

`x` | can be a list of pathways or a single pathway
`to` | a string describing the type of the identifier. Can assume the values `"entrez"`, `"symbol"` or the name of one of the columns provided by an Annotation package (for example, `"UNIPROT"`).

### Value

A `Pathway` object.

### See Also

`Pathway`

### Examples

      r <- pathways("hsapiens", "reactome")
      convertIdentifiers(r$`mTOR signalling`, "symbol")

[Package graphite version 1.26.3 Index]