boxplotplus2 {genefu} | R Documentation

## Box plot of group of values with corresponding jittered points

### Description

This function allows for display a boxplot with jittered points.

### Usage

    boxplotplus2(x, .jit = 0.25, .las = 1, .ylim, box.col = "lightgrey",
      pt.col = "blue", pt.cex = 0.5, pt.pch = 16, med.line = FALSE,
      med.col = "goldenrod", ...)

### Arguments

`x` | `x` could be a list of group values or a matrix (each group is a row).
`.jit` | Amount of jittering noise.
`.las` | Numeric in 0,1,2,3; the style of axis labels.
`.ylim` | Range for y axis.
`box.col` | Color for boxes.
`pt.col` | Color for groups (jittered points).
`pt.cex` | A numerical value giving the amount by which plotting jittered points should be magnified relative to the default.
`pt.pch` | Either an integer specifying a symbol or a single character to be used as the default in plotting jittered points. See `points` for possible values and their interpretation.
`med.line` | `TRUE` if a line should link the median of each group, `FALSE` otherwise.
`med.col` | Color of `med.line`.
`...` | Additional parameters for `boxplot` function.

### Value

Number of samples in each group.

### Note

2.21.2006 - Christos Hatzis, Nuvera Biosciences

### Author(s)

Christos Hatzis

### See Also

`boxplot`, `jitter`

### Examples

    dd <- list("G1"=runif(20), "G2"=rexp(30) * -1.1, "G3"=rnorm(15) * 1.3)
    boxplotplus2(x=dd, .las=3, .jit=0.75, .ylim=c(-3,3), pt.cex=0.75,
      pt.col=c(rep("darkred", 20), rep("darkgreen", 30), rep("darkblue", 15)),
      pt.pch=c(0, 9, 17))

[Package genefu version 2.12.0 Index]