getRawBeta {funtooNorm} | R Documentation

## Computes Beta value from raw signals

### Description

Computes Beta value from raw signals

### Usage

    getRawBeta(object, offset = 100)

    ## S4 method for signature 'SampleSet'
    getRawBeta(object, offset = 100)

### Arguments

`object` | object of class SampleSet
`offset` | default is 100 as Illumina standard

### Value

a matrix containing the raw beta value for each position and each samples

### Methods (by class)

- `SampleSet`: Computes Beta value from raw signals

### Examples

    require(minfiData)
    pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
    mySampleSet=fromRGChannelSet(RGsetEx)
    r=getRawBeta(mySampleSet)

[Package funtooNorm version 1.4.0 Index]