cytof_clusterMtrx {cytofkit} | R Documentation

## Expression values by cluster

### Description

Generate a matrix of expression values for cells in a cluster

### Usage

    cytof_clusterMtrx(analysis_results, clusterMethod = NULL, cluster)

### Arguments

`analysis_results` | analysis_results output of cytofkit to extract expression values from.
`clusterMethod` | The cluster method of interest. If none is selected, the first one will be used.
`cluster` | The cluster of interest.

### Value

A data table with marker expression values of cells in a given cluster

### Examples

    dir <- system.file('extdata',package='cytofkit')
    file <- list.files(dir ,pattern='.RData$', full=TRUE)
    load(file)
    cluster2_table <- cytof_clusterMtrx(analysis_results, "Rphenograph", 2)

[Package cytofkit version 1.12.0 Index]