dc805ef04b2aa9bffab25468ed6f01de *CITATION
18e153d96d94fa63b19865b2cadd3cf5 *DESCRIPTION
48233f4d5d7c159f3697d932cd3f135d *INDEX
75b3e49297a193b76639e00812b7aa4b *Meta/Rd.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
3aa7d2e7d7283444956239fdb50c8a7f *Meta/hsearch.rds
2bea21fcd0424f08ce1e865ab215ac5b *Meta/links.rds
303ee4046a74f8305ae29469e39378bb *Meta/nsInfo.rds
fa1d45253a1597fbbbaf84022921fa50 *Meta/package.rds
de672dffd6be335f13a14f4c92bfe847 *Meta/vignette.rds
5dbf88308ac4fc5f3b80411c7fcc0014 *NAMESPACE
64e8126dcce6eb8b5f99687671f608af *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/csaw
5b24282fb233b456f06b2aeb3dbdf08d *R/csaw.rdb
2200a233ba1e701c53512a2b852e3c6f *R/csaw.rdx
310a74b478e69fe01c2280069b9a9e44 *doc/csaw.Rnw
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32e3c9361e772f4f37b46d2f20fd23e2 *doc/csawUserGuide.pdf
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3e6275988e5f3e9222b114c73fe33969 *exdata/autogen.R
77bebad4799f4b2529b17285fb3ad71b *exdata/exrange.rds
8f5785e1814aeb395ecbefbcd28b943e *exdata/pet.bam
ad94f22e3930a47ed35df14ead9905d5 *exdata/pet.bam.bai
aee969fd302a50783dc3f4d07265d302 *exdata/pet.sam
1eeaac3e8a768c1e2e20d88f4db06652 *exdata/rep1.bam
9e5e8083f8055a37c42dad4259c6f41e *exdata/rep1.bam.bai
93884697c7e684680f39b6f181602b5d *exdata/rep2.bam
4c9ece18e196cc1f35f17266bc11b469 *exdata/rep2.bam.bai
5a696d8751ab3a373a18cb24833283bd *help/AnIndex
a42d89334e0a9249c7b4682bbe7e52cc *help/aliases.rds
b37aa202ab49e0035462f9e40369ce67 *help/csaw.rdb
5a24509c8310c39e77261642379ce9dc *help/csaw.rdx
fc21563b4247b20012924b64f028abd0 *help/paths.rds
1ea77aab0ad208c6b2f7545f62c0f2b2 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4870516a770fc40040af7554a059d073 *html/SEmethods.html
624a7be2975997d25701a4f1b9c05c91 *html/checkBimodality.html
b5dd80ab2ea59cfc7596e37f85dec2d1 *html/clusterFDR.html
9967342950a9332ed97699c6c8467bed *html/clusterWindows.html
3dd2c350877ed519538401e9d26c6b1c *html/combineTests.html
7154d929b316708a69cfccbe30a98c5f *html/consolidateClusters.html
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a2801a9ac5eb433d9a9adf16dc54b9a1 *html/correlateReads.html
396e921dff88c2d3bb4cbda97dfc66ce *html/csawUsersGuide.html
d5ded2402382e5464d95abab94ba10cf *html/detailRanges.html
422cc11b208ff6050bd5d93a913403b0 *html/empiricalFDR.html
eae86a0d73fbce0bee8f25aca8cd45e5 *html/extractReads.html
bc202df7a8012857282a71f5c44e5533 *html/filterWindows.html
97bd72d6d33d35b34423def5ccbd5c6d *html/findMaxima.html
ee4e37424a2a9556f5d896f79e64fdee *html/getBestTest.html
431d98ef9649940807f4a06000979282 *html/getPESizes.html
94e3344789bc60eb15a1ad226a9f6d0f *html/getWidths.html
60cde97b2c2dbc0d4ebce09423f80970 *html/maximizeCcf.html
3ec0f7f5b94556f2285df270c1bcbc25 *html/mergeWindows.html
56c24a60b912a61cbc0c071d692180a9 *html/mixedClusters.html
1039d82cd8e8044782f243de1e93dda9 *html/normOffsets.html
c19863ba701d4c480561032ea8ec7b56 *html/overlapStats.html
aa16ceb98201379a35b7bd7097ea40c4 *html/profileSites.html
cb61ce0fb0403bd129725b47370660c2 *html/readParam.html
40ec3f9e63f15bb7eec6134fedc628f4 *html/regionCounts.html
ba52b116d5f3aa64de750c2d12a10ce6 *html/scaledAverage.html
2e57cc893ca00d4b886270e7a28ef0e7 *html/strandedCounts.html
3334fc577643e9f27f9ab10e7181a346 *html/upweightSummit.html
fdf1a0cbc1a6d04fdc1372e87f3d4c0f *html/windowCounts.html
ab20133511fb982d8235b55822769a62 *html/wwhm.html
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553a220f3a16243354010846ec1bec29 *libs/x64/csaw.dll
c7902ad6c0e56849a55ba3f34b2b54b1 *tests/run_all_tests.sh
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2f86518d51f96a5a847472afd480f078 *tests/test-best.R
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4ac3dc5af0ccb0aaf70843db7617a464 *tests/test-profile.R
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8bd6079fda89bf849577e6f2e3b797fb *tests/test-region.R
03a456ca09e7af5334f5aa89f724ea39 *tests/test-region.Rout.save
