# Cross Platform Meta-Analysis of Microarray Data

## Documentation for package ‘crossmeta’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

add_sources | Add sample source information for meta-analysis.
contribute | Contribute results of meta-analysis to public database.
diff_expr | Differential expression analysis of esets.
diff_path | Differential expression of KEGG pathways.
es_meta | Effect size combination meta analysis.
explore_paths | Explore pathway meta analyses.
get_raw | Download and unpack microarray supplementary files from GEO.
gs.names | Map between KEGG pathway numbers and names.
gslist | KEGG human pathway genes.
load_diff | Load previous differential expression analyses.
load_path | Load previous pathway analyses.
load_raw | Load and annotate raw data downloaded from GEO.
open_raw_illum | Open raw Illumina microarray files.
path_meta | Pathway p-value meta analysis.
setup_prev | Setup selections when many samples.
symbol_annot | Add hgnc symbol to expression set.