plotPvals {cpvSNP} | R Documentation

## Create a Plot of P-Values Against Number of SNPs per Set for All Sets in a Collection

### Description

Plots association test p-values against number of SNPs per gene set.

### Usage

    plotPvals(set, title = "", xlab = "SNPs per Gene Set", ylab = "PValue",
      ...)

### Arguments

`set` | An object of class `GeneSetResultCollection`.
`title` | A character string containing the title of the plot. Default is "", a blank title.
`xlab` | A character vector with the label for the x-axis on the plot. Default is `SNPs per Gene Set`.
`ylab` | A character vector holding the label for the y-axis on the plot. Default is `PValue`.
`...` | Further arguments to be passed to the plotting methods, such as graphical parameters.

### Details

Creates a plot of all p-values against the number of SNPs in the gene set, for all sets within a collection.

### Value

Creates a plot.

### Author(s)

Caitlin McHugh mchughc@uw.edu

[Package cpvSNP version 1.12.0 Index]