Psoriasis {cogena} | R Documentation

## Psoriasis dataset.

### Description

An example dataset of Psoriasis. This dataset is used for illustration of the usage of `cogena` package. It has been normalised the expression profling using `rma` method, filtered some non-informative genes using `MetaDE` package and analysed the differentially expressed genes using `limma` package with the cut-off adjuested p-value 0.05 and abs(logFC) >=1.

### Format

two objects: DEexprs and sampleLabel.

DEexprs

  expression of DEG. There are 706 DEGs and 116 samples.

sampleLabel

  the label of sample, There are 58 control and 58 Psoriasis.

### Source

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13355

[Package cogena version 1.14.0 Index]