bg_sequences {cobindR} | R Documentation

## list of background sequence

### Description

list of background sequence

### Usage

    ## S4 method for signature 'cobindr'
    bg_sequences(x)
    ## S4 replacement method for signature 'cobindr,list'
    bg_sequences(x) <- value

### Arguments

`x` | a cobindr object
`value` | list of background sequence of type SeqObj

### Value

list of background sequences (SeqObj)

### Author(s)

Rob Lehmann <r.lehmann@biologie.hu-berlin.de>

### See Also

`uid`,`name`,`bg_sequences`,`bg_sequences`,`desc`,`configuration`,`binding_sites`,`bg_binding_sites`,`pfm`,`pairs`,`bg_pairs`,`pairs_of_interest`

### Examples

    cfg <- cobindRConfiguration()
    sequence_type(cfg) <- 'fasta'
    sequence_source(cfg) <- system.file('extdata/sox_oct_example_vignette_seqs.fasta',package='cobindR')
    sequence_origin(cfg) <- 'Mouse Embryonic Stem Cell Example ChIP-Seq Oct4 Peak bg_sequences'
    cbr <- cobindr(cfg)
    length(bg_sequences(cbr))

[Package cobindR version 1.18.0 Index]