chimeraviz-internals-fusions_to_gene_label_data {chimeraviz} | R Documentation

## Create gene label data for RCircos from the given fusions.

### Description

This function takes a list of Fusion objects and creates a data frame in the format that RCircos.Gene.Name.Plot() expects for gene label data.

### Usage

    .fusions_to_gene_label_data(fusion_list)

### Arguments

`fusion_list` | A list of Fusion objects.

### Value

A data frame with fusion gene label data compatible with RCircos.Gene.Name.Plot()

# @examples # Apparently examples shouldn't be set on private functions defuse833ke <- system.file("extdata", "defuse_833ke_results.filtered.tsv", package="chimeraviz") fusions <- import_defuse(defuse833ke, "hg19", 3) labelData <- chimeraviz::.fusions_to_gene_label_data(fusions) # This labelData can be used with RCircos.Gene.Connector.Plot() and RCircos.Gene.Name.Plot()

[Package chimeraviz version 1.6.2 Index]