get_fusion_by_chromosome {chimeraviz} | R Documentation

## Find fusions that involves genes in the given chromosome.

### Description

Helper function to retrieve the Fusion objects that involves genes in the given chromosome name.

### Usage

    get_fusion_by_chromosome(fusion_list, chr)

### Arguments

`fusion_list` | A list of Fusion objects.
`chr` | The chromosome name we're looking for fusions in.

### Value

A list of Fusion objects.

### Examples

    defuse833ke <- system.file(
      "extdata",
      "defuse_833ke_results.filtered.tsv",
      package="chimeraviz")
    fusions <- import_defuse(defuse833ke, "hg19", 1)
    length(get_fusion_by_chromosome(fusions, "chr1"))
    # [1] 1

[Package chimeraviz version 1.6.2 Index]