methylDemoData {caOmicsV} | R Documentation

## Methylation Demo Data Set

### Description

A data frame with beta values of 26 genes in 60 samples. Used for bar plot on caOmicsV bioNetCircos layout demo, and for category plot on caOmicsV bioNet layout demo after transforming to category data.

### Usage

    data("methylDemoData")

### Format

A data frame with 26 observations on the following 61 variables.

`Gene_Symbol`

  a factor with levels `ACTN1` `ADAMTS13` `AMIGO3` `ATP2A1` `BCO2` `CDKN3` `CFP` `CNBP` `COL15A1` `CSRNP1` `CXCL12` `DBH` `DDX55` `ECM1` `ELOVL1` `ESM1` `FAM81A` `FCN3` `KCNQ1` `LEPREL1` `LIFR` `LILRA6` `LILRB5` `LOC222699` `LOC283050` `LRRC16A` `LYVE1` `MAEL` `MAN1B1` `MRPS25` `MT1F` `NIPA2` `NPHP4` `NR5A2` `OLFML3` `PLVAP` `PROX1` `PTH1R` `RBL2` `RCAN1` `RND3` `SEMA3F` `SLC26A6` `TOMM40L` `TSEN34` `VDAC3`

`TCGA.BC.A216.Normal`

  a numeric vector

`TCGA.BD.A2L6.Normal`

  a numeric vector

`TCGA.BD.A3EP.Normal`

  a numeric vector

`TCGA.DD.A113.Normal`

  a numeric vector

`TCGA.DD.A114.Normal`

  a numeric vector

`TCGA.DD.A118.Normal`

  a numeric vector

`TCGA.DD.A119.Normal`

  a numeric vector

`TCGA.DD.A11A.Normal`

  a numeric vector

`TCGA.DD.A11B.Normal`

  a numeric vector

`TCGA.DD.A11C.Normal`

  a numeric vector

`TCGA.DD.A11D.Normal`

  a numeric vector

`TCGA.DD.A1EB.Normal`

  a numeric vector

`TCGA.DD.A1EC.Normal`

  a numeric vector

`TCGA.DD.A1EG.Normal`

  a numeric vector

`TCGA.DD.A1EH.Normal`

  a numeric vector

`TCGA.DD.A1EI.Normal`

  a numeric vector

`TCGA.DD.A1EJ.Normal`

  a numeric vector

`TCGA.DD.A1EL.Normal`

  a numeric vector

`TCGA.DD.A39V.Normal`

  a numeric vector

`TCGA.DD.A39W.Normal`

  a numeric vector

`TCGA.DD.A39X.Normal`

  a numeric vector

`TCGA.DD.A39Z.Normal`

  a numeric vector

`TCGA.DD.A3A1.Normal`

  a numeric vector

`TCGA.DD.A3A2.Normal`

  a numeric vector

`TCGA.DD.A3A3.Normal`

  a numeric vector

`TCGA.EP.A12J.Normal`

  a numeric vector

`TCGA.EP.A26S.Normal`

  a numeric vector

`TCGA.ES.A2HT.Normal`

  a numeric vector

`TCGA.FV.A23B.Normal`

  a numeric vector

`TCGA.FV.A2QR.Normal`

  a numeric vector

`TCGA.BC.A216.Tumor`

  a numeric vector

`TCGA.BD.A2L6.Tumor`

  a numeric vector

`TCGA.BD.A3EP.Tumor`

  a numeric vector

`TCGA.DD.A113.Tumor`

  a numeric vector

`TCGA.DD.A114.Tumor`

  a numeric vector

`TCGA.DD.A118.Tumor`

  a numeric vector

`TCGA.DD.A119.Tumor`

  a numeric vector

`TCGA.DD.A11A.Tumor`

  a numeric vector

`TCGA.DD.A11B.Tumor`

  a numeric vector

`TCGA.DD.A11C.Tumor`

  a numeric vector

`TCGA.DD.A11D.Tumor`

  a numeric vector

`TCGA.DD.A1EB.Tumor`

  a numeric vector

`TCGA.DD.A1EC.Tumor`

  a numeric vector

`TCGA.DD.A1EG.Tumor`

  a numeric vector

`TCGA.DD.A1EH.Tumor`

  a numeric vector

`TCGA.DD.A1EI.Tumor`

  a numeric vector

`TCGA.DD.A1EJ.Tumor`

  a numeric vector

`TCGA.DD.A1EL.Tumor`

  a numeric vector

`TCGA.DD.A39V.Tumor`

  a numeric vector

`TCGA.DD.A39W.Tumor`

  a numeric vector

`TCGA.DD.A39X.Tumor`

  a numeric vector

`TCGA.DD.A39Z.Tumor`

  a numeric vector

`TCGA.DD.A3A1.Tumor`

  a numeric vector

`TCGA.DD.A3A2.Tumor`

  a numeric vector

`TCGA.DD.A3A3.Tumor`

  a numeric vector

`TCGA.EP.A12J.Tumor`

  a numeric vector

`TCGA.EP.A26S.Tumor`

  a numeric vector

`TCGA.ES.A2HT.Tumor`

  a numeric vector

`TCGA.FV.A23B.Tumor`

  a numeric vector

`TCGA.FV.A2QR.Tumor`

  a numeric vector

### Value

None

### Examples

        data(methylDemoData)

[Package caOmicsV version 1.10.0 Index]