CNVDemoData {caOmicsV} | R Documentation

## Demo Data Set for Copy Number Variation

### Description

A data frame with copy number variation of 26 genes in 60 samples. Used for point plot demo on caOmicsV bioNetCircos layout, or binary data plot on caOmicsV bioMatrix layout after transformed to binary data.

### Usage

    data("CNVDemoData")

### Format

A data frame with 26 observations on the following 61 variables.

`Gene_Symbol`

  a factor with levels `ACTN1` `ADAMTS13` `AMIGO3` `ATP2A1` `BCO2` `CDKN3` `CFP` `CNBP` `COL15A1` `CSRNP1` `CXCL12` `DBH` `DDX55` `ECM1` `ELOVL1` `ESM1` `FAM81A` `FCN3` `KCNQ1` `LEPREL1` `LIFR` `LILRA6` `LILRB5` `LOC222699` `LOC283050` `LRRC16A` `LYVE1` `MAEL` `MAN1B1` `MRPS25` `MT1F` `NIPA2` `NPHP4` `NR5A2` `OLFML3` `PLVAP` `PROX1` `PTH1R` `RBL2` `RCAN1` `RND3` `SEMA3F` `SLC26A6` `TOMM40L` `TSEN34` `VDAC3`

`TCGA.BC.A216.Normal`

  a numeric vector

`TCGA.BD.A2L6.Normal`

  a numeric vector

`TCGA.BD.A3EP.Normal`

  a numeric vector

`TCGA.DD.A113.Normal`

  a numeric vector

`TCGA.DD.A114.Normal`

  a numeric vector

`TCGA.DD.A118.Normal`

  a numeric vector

`TCGA.DD.A119.Normal`

  a numeric vector

`TCGA.DD.A11A.Normal`

  a numeric vector

`TCGA.DD.A11B.Normal`

  a numeric vector

`TCGA.DD.A11C.Normal`

  a numeric vector

`TCGA.DD.A11D.Normal`

  a numeric vector

`TCGA.DD.A1EB.Normal`

  a numeric vector

`TCGA.DD.A1EC.Normal`

  a numeric vector

`TCGA.DD.A1EG.Normal`

  a numeric vector

`TCGA.DD.A1EH.Normal`

  a numeric vector

`TCGA.DD.A1EI.Normal`

  a numeric vector

`TCGA.DD.A1EJ.Normal`

  a numeric vector

`TCGA.DD.A1EL.Normal`

  a numeric vector

`TCGA.DD.A39V.Normal`

  a numeric vector

`TCGA.DD.A39W.Normal`

  a numeric vector

`TCGA.DD.A39X.Normal`

  a numeric vector

`TCGA.DD.A39Z.Normal`

  a numeric vector

`TCGA.DD.A3A1.Normal`

  a numeric vector

`TCGA.DD.A3A2.Normal`

  a numeric vector

`TCGA.DD.A3A3.Normal`

  a numeric vector

`TCGA.EP.A12J.Normal`

  a numeric vector

`TCGA.EP.A26S.Normal`

  a numeric vector

`TCGA.ES.A2HT.Normal`

  a numeric vector

`TCGA.FV.A23B.Normal`

  a numeric vector

`TCGA.FV.A2QR.Normal`

  a numeric vector

`TCGA.BC.A216.Tumor`

  a numeric vector

`TCGA.BD.A2L6.Tumor`

  a numeric vector

`TCGA.BD.A3EP.Tumor`

  a numeric vector

`TCGA.DD.A113.Tumor`

  a numeric vector

`TCGA.DD.A114.Tumor`

  a numeric vector

`TCGA.DD.A118.Tumor`

  a numeric vector

`TCGA.DD.A119.Tumor`

  a numeric vector

`TCGA.DD.A11A.Tumor`

  a numeric vector

`TCGA.DD.A11B.Tumor`

  a numeric vector

`TCGA.DD.A11C.Tumor`

  a numeric vector

`TCGA.DD.A11D.Tumor`

  a numeric vector

`TCGA.DD.A1EB.Tumor`

  a numeric vector

`TCGA.DD.A1EC.Tumor`

  a numeric vector

`TCGA.DD.A1EG.Tumor`

  a numeric vector

`TCGA.DD.A1EH.Tumor`

  a numeric vector

`TCGA.DD.A1EI.Tumor`

  a numeric vector

`TCGA.DD.A1EJ.Tumor`

  a numeric vector

`TCGA.DD.A1EL.Tumor`

  a numeric vector

`TCGA.DD.A39V.Tumor`

  a numeric vector

`TCGA.DD.A39W.Tumor`

  a numeric vector

`TCGA.DD.A39X.Tumor`

  a numeric vector

`TCGA.DD.A39Z.Tumor`

  a numeric vector

`TCGA.DD.A3A1.Tumor`

  a numeric vector

`TCGA.DD.A3A2.Tumor`

  a numeric vector

`TCGA.DD.A3A3.Tumor`

  a numeric vector

`TCGA.EP.A12J.Tumor`

  a numeric vector

`TCGA.EP.A26S.Tumor`

  a numeric vector

`TCGA.ES.A2HT.Tumor`

  a numeric vector

`TCGA.FV.A23B.Tumor`

  a numeric vector

`TCGA.FV.A2QR.Tumor`

  a numeric vector

### Value

None

### Examples

        data(CNVDemoData)

[Package caOmicsV version 1.10.0 Index]