9faf4aae8b603624c7bed7678c679154 *DESCRIPTION
ec16152509c981690ef24b8f1489e42c *INDEX
dd09a4b3834ede9b33b1d0dd54e75330 *Meta/Rd.rds
9b6dd6156d53468d50e3368af9c9d32a *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
a0af10ea56b4d497a1d754b27667a652 *Meta/hsearch.rds
0357f753a75751dd7ffb4ee65b3f64dd *Meta/links.rds
f9dbe9920563fa8662e95a33784203a4 *Meta/nsInfo.rds
d6c8632a6a117ac525829fa957cef0e1 *Meta/package.rds
58f0bba4d5d3b9e8c8e8d492b1a75348 *Meta/vignette.rds
aae06e60e6dc746d889b887cda628302 *NAMESPACE
c65cf0fd2768309df49e1428d7af9db3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/ballgown
732447d8296398d6bec5f4ce268f01ac *R/ballgown.rdb
2128a7673ca33864f6a6a690e779fef5 *R/ballgown.rdx
fdc4adf6ef6200a347ad51956acada04 *data/bg.rda
2d9b4afa8af9faedd696424c84c77ee3 *doc/ballgown.R
d132df26e404631e7d25d00e8220132b *doc/ballgown.Rmd
2800bc6ead2b63d4b21ef3f66e52cb59 *doc/ballgown.html
0cc639deed6f66de811df00c2cf7702f *doc/index.html
622fa378b59bd017d31803657a09cce4 *extdata/annot.gtf.gz
10fd676ba636429f9515f623ebb1129c *extdata/hg19_genes_small.gtf.gz
9712175d9216638edd5563dc00560e49 *extdata/sample01/e2t.ctab
b0030b9e0d835f28e036b639726cdef7 *extdata/sample01/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample01/i2t.ctab
fa4e74090f17f6f811579ced8e52d647 *extdata/sample01/i_data.ctab
7310dd98e10ceed48e2d5367230105fa *extdata/sample01/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample02/e2t.ctab
fa659af6c76684c252595fc9f2ad2ec2 *extdata/sample02/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample02/i2t.ctab
18f4d45408b0410e5b0bf99d79f3c572 *extdata/sample02/i_data.ctab
10dd7d5ec48e102ac1475fb3cb135d33 *extdata/sample02/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample03/e2t.ctab
e565208a69f2ecd85a1aaf2056bebdc7 *extdata/sample03/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample03/i2t.ctab
4e0e81a15ba6f8a425aef925fccaf4f3 *extdata/sample03/i_data.ctab
4ee176b65afbab163f0e397afb6b9a70 *extdata/sample03/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample04/e2t.ctab
b5ac5a97c30d2ad2bfb93efed28a454c *extdata/sample04/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample04/i2t.ctab
54365133f4f043d68c1482c312f160b8 *extdata/sample04/i_data.ctab
60d7e157baed349f229eddbe0499310b *extdata/sample04/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample05/e2t.ctab
5c89d35348435d41401536a9d025880d *extdata/sample05/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample05/i2t.ctab
a37a2fa552db03f6db728b484e708c13 *extdata/sample05/i_data.ctab
a4cfb5ffe4d907a6faad6935c5c51335 *extdata/sample05/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample06/e2t.ctab
bd86699c8ebbb25d811ff168aa9589cf *extdata/sample06/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample06/i2t.ctab
b916772be983d7f1936933b1325aaff7 *extdata/sample06/i_data.ctab
c5112b9da2a11eb47c22ce869c5c577b *extdata/sample06/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample07/e2t.ctab
58d8458a2de9c9310e978eefa83e5d26 *extdata/sample07/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample07/i2t.ctab
4cadb06d0ad4e97f4afd6e3ba38a6b8c *extdata/sample07/i_data.ctab
d06dcf2dc5ace75162fcf572ebf38237 *extdata/sample07/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample08/e2t.ctab
3707f6490f9c582654d9f682dc089586 *extdata/sample08/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample08/i2t.ctab
67db59fe3081385a80cf46c0ae30b1e4 *extdata/sample08/i_data.ctab
e9f68ce65b6b51bbdfa329bbcd593713 *extdata/sample08/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample09/e2t.ctab
13ddfe57d05065355105307cfbad8deb *extdata/sample09/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample09/i2t.ctab
9a6f17b8c69d806f2dc1bcc4d0a7e48e *extdata/sample09/i_data.ctab
d5a1d478ca26faef1eea955d85d88030 *extdata/sample09/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample10/e2t.ctab
f9f67a721bc55790662e237e483c7411 *extdata/sample10/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample10/i2t.ctab
e261de726c53d0e9b5257c324c5f54d6 *extdata/sample10/i_data.ctab
cbf8240e1691fdbfc34ceba545a277bf *extdata/sample10/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample11/e2t.ctab
71c0002b297b3e475fde5458027df7b4 *extdata/sample11/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample11/i2t.ctab
a8dabb84c1dc76efebf50c830c7f4c9d *extdata/sample11/i_data.ctab
a9ebafba6774907b0964eefa91668bf7 *extdata/sample11/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample12/e2t.ctab
d5f54ef0b74fc0edec98a82dc83735b6 *extdata/sample12/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample12/i2t.ctab
04050031a1f304245c476804ddb54fe9 *extdata/sample12/i_data.ctab
111c8e9db58e26bd3848eddb082c39d3 *extdata/sample12/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample13/e2t.ctab
027c904f9a659d93a482f8b61715e4f7 *extdata/sample13/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample13/i2t.ctab
1289d33f9adbfc0b22ee844b78705187 *extdata/sample13/i_data.ctab
5f29fbd76326281ecef7299529e2e2c7 *extdata/sample13/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample14/e2t.ctab
f5924b89410634ef6a0a339e3538833a *extdata/sample14/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample14/i2t.ctab
dfd8beda181392651e3008090de94797 *extdata/sample14/i_data.ctab
e8a1177afd72f2b53d59866627c21285 *extdata/sample14/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample15/e2t.ctab
61e69e7a7f079ff09849108519359eb6 *extdata/sample15/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample15/i2t.ctab
6b197ecc03c3dda35730b0b7c70eef7d *extdata/sample15/i_data.ctab
9150bb647c090bb55de60e34fb2cc8f7 *extdata/sample15/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample16/e2t.ctab
79410e23d94f03fa07ac00e137852253 *extdata/sample16/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample16/i2t.ctab
eadaaee7bc4778cba79cd67f34a58719 *extdata/sample16/i_data.ctab
a18774c9229fd8119b9d74a7efc543f9 *extdata/sample16/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample17/e2t.ctab
92a858a135d9dac9eb54718410a1e982 *extdata/sample17/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample17/i2t.ctab
4862d8ad80d8b5c484f88f3df913461e *extdata/sample17/i_data.ctab
c98ff348558c251853ededb08b5a6185 *extdata/sample17/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample18/e2t.ctab
2cf81d2dcb51711c8966da684399dda0 *extdata/sample18/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample18/i2t.ctab
d9078340ce6d07253dee3997934e3ffe *extdata/sample18/i_data.ctab
e55364bb807ddaa218a31685250a9fc8 *extdata/sample18/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample19/e2t.ctab
aba97b698279a2a6cbc4fa1ec26692ee *extdata/sample19/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample19/i2t.ctab
578f2fd5be5c7ace44c725f9ccb6f0d0 *extdata/sample19/i_data.ctab
c5a208ca236b3dea8a513f316c7485ce *extdata/sample19/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample20/e2t.ctab
6e2e4beeef77538b8b28148ad262cd88 *extdata/sample20/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample20/i2t.ctab
64271ce0582afe692d9ea149c577efdb *extdata/sample20/i_data.ctab
eb41b9487bea5ed79725a869892e2eb5 *extdata/sample20/t_data.ctab
a48796f1738e4ab5f643993ddebdb3e9 *extdata/tiny.genes.results.gz
c2be2c44533cf6ab58cc1e6dd82c99f8 *extdata/tiny.isoforms.results.gz
5c6c82cd51f78e83547d6ef0bea5f9f3 *extdata/tiny2.genes.results.gz
cdf008df213762f620bc5d551b918060 *extdata/tiny2.isoforms.results.gz
191712a21ff66e2387278203795a5486 *help/AnIndex
1bf504c4d41bc3c2bebac10edca952eb *help/aliases.rds
2c32f8fb071dd6261dea48d4b733acce *help/ballgown.rdb
c33032fa6f64cb7fc6b25a52e7fe57ac *help/ballgown.rdx
cb11f943cb317dd5f8743cb0b04c122f *help/paths.rds
8d115bad3e3f91ab132cab58365d083a *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
621e10c7547c9482acaf83a3f7ffe8e7 *html/annotate_assembly.html
c4173e0f21b8f6c23d202b92e093f79f *html/ballgown-class.html
47f6a20d5e2eefbbe409ede30cae9f62 *html/ballgown-constructor.html
a350f2de527dd7955b6beb2c1a9d8713 *html/ballgown-package.html
54bed7c01948e87fe9ae46ea8756e82c *html/ballgownrsem.html
85613227872c8a8d0eb3e379752bfe02 *html/bg.html
ad03b22de8749a4f3789b7b550f95a18 *html/checkAssembledTx.html
0aabd127862291f944dfc1bce412901c *html/clusterTranscripts.html
d45eda0f5d801bccb82e5ead7e18cce6 *html/collapseTranscripts.html
afcc877378f167428984798e2e40e165 *html/contains.html
3a8d20ad982e0ed4d0b051c806533cfa *html/dirs.html
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d10b897cf932d5ad970a0a045e3812be *html/expr-replace.html
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53b3f4fa4278f3389af6ba403604358b *html/exprfilter.html
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15b58cc08fbd1e7f1019fd32d530b0ff *html/getAttributeField.html
62c5c3943ef5d4547f29ed92a6977fa4 *html/getGenes.html
92c6ff3fc2d3a5b372a05f0743b721e4 *html/gexpr.html
67f596a921d74427fd18baea6356cc8d *html/gffRead.html
44c6379d415b7e922d11c1edc8ff0c4a *html/gffReadGR.html
390701c68cd5b5f9c7c5e932ad91f3fd *html/iexpr.html
92062e5d9cc28dfcb61d5fb15515349d *html/indexes-replace.html
f7041f2792d8c615575fe4db0754e8c3 *html/indexes.html
7b7c449a1447a081eb00b92e363d6d00 *html/last.html
d78a6184e976bff7d12255b6a36415c1 *html/mergedDate.html
86cc5e088616d92e6c70f5dbd0685392 *html/pData-replace.html
e7e8935d2c875c2ce5ef8bdce739c4e3 *html/pData.html
4599562403154410271e89f3f6571cf4 *html/pctOverlap.html
cb00952146e3218fdb993eb980f29412 *html/plotLatentTranscripts.html
28dd4237d41bdf0c4cf1b6606e7f67b0 *html/plotMeans.html
697cc8b3de866ed84506e5bf7ff3ef65 *html/plotTranscripts.html
b86df42e923a04506ceebff09b0a369a *html/sampleNames.html
2257343f1bdfe24d50289817741cc42f *html/seqnames.html
81349152084eb8ea9e045f6dff276404 *html/stattest.html
183169323d04ca82675f335053e59607 *html/structure.html
d8099c5815c153450093972df1afc068 *html/subset.html
8408f49ea0e99f5f8c016e5e898a8274 *html/tGene.html
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58e3c21d58b21dbd5b4f515ca452f3c7 *html/transcriptNames.html
2dbd2279fa6c8f049e1fa5953d270b30 *html/writeFiles.html
