d78e5d4bfb7b395cc500293e255d3365 *CITATION
1ec5d2f7f8a5a49a45b6684d9b928263 *DESCRIPTION
43efaf81f65fd2b2adfef4a4020e9fec *INDEX
753cb9aabb79df962995222bdf93c12a *Meta/Rd.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
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7ed656778059b9dc8049f8908ff0ebd2 *Meta/links.rds
deb1d71dcefeb8baa1cf907f428a79aa *Meta/nsInfo.rds
5e77330c302fd5cf8d55739d206bd948 *Meta/package.rds
0a9afc95b5f459b67c1ea96446d96c37 *Meta/vignette.rds
6f2880d889b5f9d97e515ac3a38ef1cc *NAMESPACE
9c5e9a2f1497831b4299c3f979e74336 *NEWS
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c5afb93efda76d4b73e15ef054bf11c3 *R/VariantAnnotation.rdx
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d45aa9e2c736ae48706a388fa61770d4 *doc/filterVcf.Rnw
bb0903f918588f1901fa7efd3f995a40 *doc/filterVcf.pdf
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c303d8a0cc7e6314b5f42348221b0d3b *extdata/chr22.vcf.gz.tbi
a4ca21413e322997ed17c5429e65b9ca *extdata/chr7-sub.vcf.gz
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b325a60a320b6aebb41d41d1dafb9c6d *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
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dac0f427ab59994c11859f2b09bab618 *extdata/hapmap_exome_chr22.vcf.gz
ff0775ab73d21645fa114d487e5ebcfd *extdata/hapmap_exome_chr22.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
6de096984907156a885c5e944d0896b9 *help/AnIndex
0e536b7e844631ccde2ddb4f9f91784a *help/VariantAnnotation.rdb
660ea417ed689812ca51f89827ea4fbe *help/VariantAnnotation.rdx
8570d1348dc1bac2f7cf649c4e1d8c92 *help/aliases.rds
85b79f3472ea09b10418af959dd52b12 *help/paths.rds
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905ecd539791745699ef940361679310 *html/GLtoGP.html
6948147585c4a93478435f0038c12b0e *html/PROVEANDb-class.html
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6289164e1cde8c67b95e890e0be1e2d7 *html/PolyPhenDbColumns.html
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122c7c0b0a4c33c101f992470f6e45b5 *html/SIFTDb-class.html
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ae686079c714dd18e18ef27d4e1a5e0d *html/ScanVcfParam-class.html
096c79b17393e5ee885f3b862b063bf7 *html/VCF-class.html
4bf2f099a2818b8e28c969fc57496ad3 *html/VCFHeader-class.html
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1c2de94cb2dd5445c10486a9b20b2b91 *html/VRangesList-class.html
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3ecf0d030c0c8c3bf5f186df1aea9056 *html/VcfFile-class.html
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c2b9b5eee3e8f43a1ef6c108e77735d2 *html/filterVcf-methods.html
1a53125f93264c9c707bc92f134dbae1 *html/genotypeToSnpMatrix-methods.html
e3635b6d3c7adfff57e24912d915d9c1 *html/getTranscriptSeqs-methods.html
94fa4e06e9bd0877556d7711b256bebf *html/indexVcf-method.html
788871a77e4998727f17c58226f59ac5 *html/isSNV-methods.html
d053a38fcbbb5d349776a2e50de8c1c3 *html/locateVariants-methods.html
49aa6a72172214cf1344d54fbdc8fb5e *html/predictCoding-methods.html
2ccb1ef47242defdf51224c889b68cb2 *html/probabilityToSnpMatrix.html
0b543bfabb3bf1d73d07b68815957b66 *html/readVcf-methods.html
0c71b3df4aa000d686f4dbc5384d45a9 *html/scanVcf-methods.html
b3e955b2fce969e3fa43f79136232e60 *html/seqinfo-method.html
d25aee9d9531da56b4055db27a695e64 *html/snpSummary.html
375b817af0ac4afaa749407d0a28dc6b *html/summarizeVariants-methods.html
754cd871397939e21a313cc528578098 *html/writeVcf-methods.html
4aa74d72784322dc0ff0ecc2fe3dde5d *libs/i386/VariantAnnotation.dll
0db1661fec81381e5557b1e960aa6378 *libs/x64/VariantAnnotation.dll
17f1c6f05e7a9ff7756b6efabce3f745 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
6e6064d7c429a35bc80235a253eed6f3 *unitTests/cases/VarScan_header.vcf
0c5f14796bf4eb3683ceff8e559f43d7 *unitTests/cases/banded_gvcf.vcf
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0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
0b5b4448b336d5a5b56d18cf818f9712 *unitTests/test_SIFTandPolyPhen.R
d08510e74b080b9d0830a1941740ea90 *unitTests/test_ScanVcfParam-class.R
ebcc3b0eb0b0d8d35618bcd081768b0a *unitTests/test_VCF-class.R
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9561c767f5acb5fc74cd359c678612cf *unitTests/test_filterVcf.R
7c00151d0528b740a94ddb9a8504898a *unitTests/test_genotypeToSnpMatrix.R
2c2205ed5a0c6d352887365ce90f025a *unitTests/test_isSNV.R
3fb1e09a0eb712fc6dac04bac8c2bf3a *unitTests/test_locateVariants-methods.R
b92e0e7b951b75b850b37d0204efa1f5 *unitTests/test_predictCoding-methods.R
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8afab6fc17e9f3105b9b13665c8d10de *unitTests/test_scanVcf.R
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d98bfd1bf44ccafabe740b9ae42d1208 *unitTests/test_summarizeVariants-methods.R
63c02835c8ecc7f75d976dff37e41444 *unitTests/test_writeVcf-methods.R
