TCGAanalyze_analyseGRN {TCGAbiolinks} | R Documentation

## Generate network

### Description

TCGAanalyze_analyseGRN perform gene regulatory network.

### Usage

    TCGAanalyze_analyseGRN(TFs, normCounts, kNum)

### Arguments

`TFs` | a vector of genes.
`normCounts` | is a matrix of gene expression with genes in rows and samples in columns.
`kNum` | the number of nearest neighbors to consider to estimate the mutual information. Must be less than the number of columns of normCounts.

### Value

an adjacent matrix

[Package TCGAbiolinks version 2.8.4 Index]