Accessors               Accessor and replacement functions for the
                        slots of a SummarizedBenchmark object.
BenchDesign             Create a new BenchDesign
SummarizedBenchmark     Constructor function for SummarizedBenchmark
                        objects.
SummarizedBenchmark-class
                        SummarizedBenchmark class documentation
addMethod               Add new method to BenchDesign object
addPerformanceMetric    Add a performance metric definition to a
                        'SummarizedBenchmark' object.
allSB                   SummarizedBenchmark object of isoform
                        quantification results
availableMetrics        availableMetrics
buildBench              Make SummarizedBenchmark from BenchDesign
dropMethod              Remove method from BenchDesign object
estimateMetricsForAssay
                        Estimate performance metrics.
expandMethod            Expand method in BenchDesign object across
                        parameter settings
modifyMethod            Modify definition of method in BenchDesign
                        object
performanceMetrics      Accessor and replacement functions for the slot
                        'performanceMetrics' of a SummarizedBenchmark
                        object.
plotMethodsOverlap      Calls UpSetR for qvalues of a
                        'SummarizedBenchmark' object.
plotROC                 Plotting ROC curves
printMethod             Pretty print methods in a BenchDesign
sb                      SummarizedBenchmark example
tdat                    Example data.frame containing results for 50
                        two-sample t-tests.
tidyUpMetrics           Reformat performance metrics to a long format.
