SpidermiRanalyze_mirna_network {SpidermiR} | R Documentation

## Integration of microRNA target networks.

### Description

SpidermiRanalyze_mirna_network creates a data frame with miRNA gene interaction. The user can filter the search by disease.

### Usage

    SpidermiRanalyze_mirna_network(data, miR_trg, mirna_t = NULL,
      disease = NULL)

### Arguments

`data` | SpidermiRprepare_NET output
`miR_trg` | a parameter to indicate miRNA target database used. The user can use: 1) validated database (val) or 2) predicted database (pred)
`mirna_t` | a list given by the user with miRNA list of interest
`disease` | miRNA gene interaction can be filtered by disease using the parameters obatined from SpidermiRquery_disease

### Value

dataframe with miRNA gene interaction data

### Examples

    GS_net <- data.frame(gA=c('SMAD','MYC'),gB=c('FOXM1','KRAS'),stringsAsFactors=FALSE)
    miRNA_NET<-SpidermiRanalyze_mirna_network(data=GS_net,disease="prostate cancer",miR_trg="val")

[Package SpidermiR version 1.10.0 Index]