SpidermiRanalyze_subnetwork_neigh {SpidermiR} | R Documentation

## Searching by biomarkers of interest and all the edges among this bunch of nodes

### Description

SpidermiRanalyze_subnetwork_neigh create a sub network composed by the nodes in BI and, if some of them are connected to other nodes (even if not in BI), take also them (include all the edges among this bunch of nodes).

### Usage

    SpidermiRanalyze_subnetwork_neigh(data, BI)

### Arguments

`data` | SpidermiRanalyze_mirna_network output or SpidermiRanalyze_mirna_gene_complnet
`BI` | a set of biomarkers of interest

### Value

dataframe with interactions

### Examples

    miRNA_cN <-data.frame(gA=c('hsa-let-7a','hsa-miR-300'),gB=c('FOXM1','KPNA4'),stringsAsFactors=FALSE)
    biomark_of_interest<-c("hsa-let-7a","CDK","FOXO1","hsa-miR-27a")
    GIdirect_net_neigh<-SpidermiRanalyze_subnetwork_neigh(data=miRNA_cN,BI=biomark_of_interest)

[Package SpidermiR version 1.10.0 Index]