Run {SIMAT} | R Documentation

## Extracted peaks from one SIM run.

### Description

The information in this data set, was obtained by using `readCDF` function. It includes a variable called `Run` which contains scans, i.e. mass and intensity pairs, and retention time of the scans for the run.

### Usage

    data(Run)

### Format

A list with variable number of observations on the following 4 variables:

`rt`

  a numeric vector of retention times of the scans.

`sc`

  a numeric vector of scan indexes from 1 to the number of scans.

`tic`

  a numeric vector of the total ion chromatogram (TIC) of the run.

`pk`

  a list including same number of items as `sc` field where each item of the list includes a matrix with two columns containing the mass and related intensity of each mass

### Details

This is the data extracted from one SIM run. It was obtained by using `readCDF` function. The data set is provided as an example to be used for functions in the package. More examples can be found in the reference.

### Value

A list

### References

http://omics.georgetown.edu/SIMAT.html

### Examples

        data(Run)

[Package SIMAT version 1.12.1 Index]