| siamcat {SIAMCAT} | R Documentation |
Function to construct an object of class siamcat-class
siamcat(...)
... |
list of arguments needed in order to construct a SIAMCAT object |
Build siamcat-class objects from their components.
A new siamcat-class object
# example with package data
fn.in.feat <- system.file('extdata',
'feat_crc_study-pop-I_N141_tax_profile_mocat_bn_specI_clusters.tsv',
package = 'SIAMCAT')
fn.in.label <- system.file('extdata',
'label_crc_study-pop-I_N141_tax_profile_mocat_bn_specI_clusters.tsv',
package = 'SIAMCAT')
fn.in.meta <- system.file('extdata',
'num_metadata_crc_study-pop-I_N141_tax_profile_mocat_bn_specI_clusters.tsv',
package = 'SIAMCAT')
feat <- read.features(fn.in.feat)
label <- read.labels(fn.in.label)
meta <- read.meta(fn.in.meta)
siamcat <- siamcat(feat, label, meta)