auto.select.rank.cut {RnBeads} | R Documentation

## auto.select.rank.cut

### Description

automatically select a rank cutoff for given ranks and p-values current implementation: sort the p-values according to rank. select as rank cutoff the rank for which the worst (i.e. max) p-value in the top list is still smaller than the best (i.e. min) p-value of the group of worst-ranking p-values of equal size as the top-list

### Usage

    auto.select.rank.cut(p, r, alpha = 0.1)

### Arguments

`p` | vector of p-values
`r` | vector of ranks
`alpha` | the percentile to select the top and bottom part of the list

### Value

the maximum rank fulfilling the criterion

### Author(s)

Fabian Mueller

[Package RnBeads version 1.12.1 Index]