rnb.plot.ct.heatmap {RnBeads} | R Documentation

## rnb.plot.ct.heatmap

### Description

Plot contributions of the cell types

### Usage

    rnb.plot.ct.heatmap(ct.obj, type = "nonnegative", writeToFile = FALSE, ...)

### Arguments

`ct.obj` | Object of class `CellTypeInferenceResult` as returned by rnb.execute.ct.estimation.
`type` | Type of cell type contributions to plot.
`writeToFile` | If `TRUE`, the plot will be written to a file.
`...` | Other arguments passed to `createReportPlot`.

### Details

The cell type contributions are visualized as a heatmap

### Value

if `writeToFile=TRUE` an object of class `ReportPlot`, or the protted matrix otherwise

### Author(s)

Pavlo Lutsik

[Package RnBeads version 1.12.1 Index]