# Random walk with restart on multiplex and heterogeneous Networks

## Documentation for package ‘RandomWalkRestartMH’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

compute.adjacency.matrix | Computes the adjacency matrix of a multiplex network
compute.transition.matrix | Computes the transition matrix of a multiplex and heterogeneous network
create.multiplex | Create multiplex graphs from individual networks
create.multiplex.default | Create multiplex graphs from individual networks
create.multiplexHet | Create multiplex heterogeneous graphs from individual networks
create.multiplexHet.default | Create multiplex heterogeneous graphs from individual networks
create.multiplexHetNetwork.topResults | Creates a Network with the top results of the Random Walk with restart on a Multiplex and Heterogeneous Network
create.multiplexNetwork.topResults | Creates a Network with the top results of the Random Walk with restart on a Multiplex Network
Disease_Network | A disease-disease similarity network.
GeneDiseaseRelations | Diseases and their causative genes
isMultiplex | Is this R object a Multiplex object?
isMultiplexHet | Is this R object a Multiplex Heterogeneous object?
isRWRMH_Results | Is this R object a RWR on Multiplex-Heterogeneous object (Results of the RWR-MH)?
isRWRM_Results | Is this R object a RWR on Multiplex object (Results of the RWR-M)?
normalize.multiplex.adjacency | Computes column normalization of an adjacency matrix
Pathway_Network | A pathway network (Pathway network)
PPI_Network | A protein-protein physical interaction network (PPI network)
Random.Walk.Restart.Multiplex | Performs Random Walk with Restart on a Multiplex Network
Random.Walk.Restart.Multiplex.default | Performs Random Walk with Restart on a Multiplex Network
Random.Walk.Restart.MultiplexHet | Performs Random Walk with Restart on a Multiplex and Heterogeneous Network
Random.Walk.Restart.MultiplexHet.default | Performs Random Walk with Restart on a Multiplex and Heterogeneous Network