print.rjmcmcNucleosomesBeforeAndAfterPostTreatment {RJMCMCNucleosomes} | R Documentation

## Formated output of predicted nucleosomes

### Description

Generated a formated output of a list marked as an `rjmcmcNucleosomesBeforeAndAfterPostTreatment` class

### Usage

    ## S3 method for class 'rjmcmcNucleosomesBeforeAndAfterPostTreatment'
    print(x, ...)

### Arguments

`x` | the output object from `rjmcmcCHR` function to be printed
`...` | arguments passed to or from other methods

### Value

an object of class `rjmcmcNucleosomesBeforeAndAfterPostTreatment`

### Author(s)

Astrid Deschenes

### Examples

    ## Load synthetic dataset of reads
    data(syntheticNucleosomeReads)

    ## Use dataset of reads to create GRanges object
    sampleGRanges <- GRanges(syntheticNucleosomeReads$dataIP)

    ## Run nucleosome detection on the entire sample
    ## Not run: result <- rjmcmcCHR(reads = sampleGRanges, zeta = 147, delta=50,
    maxLength=1200, nbrIterations = 1000, lambda = 3, kMax = 30,
    minInterval = 146, maxInterval = 292, minReads = 5, vSeed = 10113,
    nbCores = 2, saveAsRDS = FALSE)
    ## End(Not run)

    ## Print result
    ## Not run: print(result)

[Package RJMCMCNucleosomes version 1.4.0 Index]