avaSetFiltered {R453Plus1Toolbox} | R Documentation

## Amplicon Variant Analyzer data import

### Description

This is an example of an `link{AVASet-class}` object containing the output of Roche's Amplicon Variant Analyzer Software. It consists of 6 samples, 4 amplicons and 4 variants. The variants were previously filtered according to the amplicon coverage (see `setVariantFilter` for details about filtering an AVASet object).

### Usage

    data(avaSetFiltered)

### Format

Formal class 'AVASet'

### Source

‘Next-generation sequencing technology reveals a characteristic pattern of molecular mutations in 72.8 leukemia by detecting frequent alterations in TET2, CBL, RAS, and RUNX1’ (Kohlmann A et al., J Clin Oncol. 2010 Aug 20;28(24):3858-65. Epub 2010 Jul 19)

### Examples

        data(avaSetFiltered)
        avaSetFiltered

[Package R453Plus1Toolbox version 1.30.0 Index]