MMvsPS {ProCoNA} | R Documentation

## Module members vs Peptide Significance

### Description

Plots the module membership (correlation to eigenvector) against the peptide significance (correlation to phenotype) for a given trait and module

### Usage

    MMvsPS(pnet, pepdat, phenoVec, mod)

### Arguments

`pnet` | The procona network
`pepdat` | the peptide data, with rows as samples and columns as peptides
`phenoVec` | the phenotypic trait, vector
`mod` | the module of interest

### Value

returns a list of module memberships and peptide significances.

### Author(s)

David L Gibbs

### Examples

    data(ProCoNA_Data)
    #net1 <- buildProconaNetwork("peptide network", peptideData, pow=13)
    MMvsPS(net1, peptideData, phenotypes[,5], 1)

[Package ProCoNA version 1.18.0 Index]