filter-class {MotIV} | R Documentation

## Class "filter"

### Description

This object information to be apply as filter.

### Details

This class `filter` is used to selected `motiv` objects according the filter's arguments.

### Objects from the Class

Objects can be created by calls of the form `new("filter",name,tfname, top,evalueMax, lengthMax, valid)`.

### Slots

name

  A name or a list of names.

tfname

  A transcription factor name or a list of TF names.

evalueMax

  An e-value between 0 and 1.

top

  Defined the depth of the filter.

lengthMax

  The maximum motif length.

valid

  The alignment that should be considered as valid.

### Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

### See Also

`setFilter` , `filter`, `split`, `combine`

### Examples

    showClass("filter")

[Package MotIV version 1.36.0 Index]