2b1718c91d143e75a6f62bc543428938 *DESCRIPTION
0d7d43da21bd608b62293cb8cec2beae *INDEX
6273a25c49109938afc4ad2fa022fa78 *Meta/Rd.rds
75668050d4432410d9a7463ac81f44de *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
0d2bd6ba76010baf3be60c379a71b2ec *Meta/hsearch.rds
d07d4f2c601c170b5c36e88c85e553f4 *Meta/links.rds
70ab7135f3729ecb58357575c96fd203 *Meta/nsInfo.rds
91be5848992ac89fb98534c488525507 *Meta/package.rds
4d5573b67bef5000b486890640983f13 *Meta/vignette.rds
cdcb42b04205359c7a4e7c9b1b1aa622 *NAMESPACE
64850b61b619186ba39a356d074c88f6 *NEWS
e1f4dde66e67d1b13d90354b38dcbefd *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/MinimumDistance
d1b9d2d3a70e7f6fbd761e295a73b11d *R/MinimumDistance.rdb
f27747780353108096dc410fc949f8a8 *R/MinimumDistance.rdx
0e57e8c0ac03566174a91534cd0fff56 *data/md_exp.rda
d1eb803d6c58ff8f8174f739ad7a3699 *data/md_gr.rda
8a3e3917ec140296abace15fe80a7154 *data/trioSetListExample.rda
7da70a78e8ff6573a9bce7bd8ba7f221 *doc/MinimumDistance.R
fc548ab584db3abddd2d6bb5ca652afd *doc/MinimumDistance.Rnw
d96f3f9a8c594592aa9c060c1d6761e7 *doc/MinimumDistance.pdf
495dce7ecfea26efbcd55f37b50ad9b3 *doc/index.html
e03ea25b8db06926dae3d1aafebd9c33 *extdata/F.txt
efc08f8a945c313599533f15913a337c *extdata/M.txt
95db2e3447bae89e33de8a32f7c27b22 *extdata/O.txt
85bbbd3aa787fd480ae50bb2ffcd8090 *extdata/O1.txt
54e6869d2875b8cd3642e6d6fc185860 *extdata/baf.rda
ffd852d6ef47afc2784d7424175a813b *extdata/exampleFiles.R
002e045dee6803f685d493dcf6940913 *extdata/logRratio.rda
1f4fa7c977cf5e93d1c7a01856de7339 *extdata/md_granges.rds
52ee010584bb394d03f0a8eea59b735a *extdata/mdgr.rds
af6d332ea2ddb50e64beefa03b484777 *extdata/pedigreeInfo.rda
8bb642a23b584fcbaf5fb2f7b7e1bd01 *extdata/pennCNV_MendelianProb.rda
52c879d772258c1e361cf27fc7aeff24 *extdata/sample.sheet.rda
26714615fc7a01e7c93b8d8035ea3f27 *extdata/trioSet12023chr12.rda
1f5d244c8ea81e503d70887907e4b7de *help/AnIndex
0282c24a8e57151dc6e5cccd74e4249a *help/MinimumDistance.rdb
b8c8d5ba4e33f9d09eff87f165e0bb09 *help/MinimumDistance.rdx
0807adfdd7b342c3a79739564ddecec9 *help/aliases.rds
baaa75357a09f5035cb7fe84cf38b385 *help/paths.rds
fa0b775d0d0025ad71ad0e383ed15940 *html/00Index.html
41f3960f3283a85187b4b1acb32467ac *html/DNAcopyParam.html
5d11cebcd6fee94835d405f7492d145e *html/Defunct.html
75f238913a511861637587d20bfa6727 *html/Deprecated.html
012c225058b9e47431f1c9f2ba4314bc *html/FilterParamMD-class.html
da502edc11a7c631f87f673d81b2729e *html/FilterParamMD.html
f68d234cbba684146dd2b645c2178b38 *html/MAP.html
8aede5ee6a91a8204fbfe4c0a104724b *html/MAP2.html
cdbd22ed342d4c335428db25682ff1ae *html/MDRanges-class.html
9f52226c14fcdd2436f3770f80a4dc6e *html/MinDistExperiment-class.html
a52bffd08d9a7185287919d4da9d8f90 *html/MinDistExperiment.html
4c0054a2c12d78cc47b9511ab42b6516 *html/MinDistGRanges-class.html
1dde4107dad612f621ec82671e37f5c1 *html/MinDistGRanges.html
f4b56888ea75838c1be791ef22f1f39f *html/MinDistParam-class.html
401d798cab0839651b01217b05027556 *html/MinDistParam.html
69af376f5b88ee652c1d9d0c4c430175 *html/MinDistPosterior-class.html
06f273eee47404d9eab660cfef2f8a47 *html/MinimumDistance.html
a0084c70547de419aab136f578cfbb21 *html/ParentOffspring-class.html
64243f2ca3c7e8be8f10961929c0f9a4 *html/ParentOffspringList-class.html
d66aa3a0bace15adabeefbf6ef2f643e *html/Pedigree-class.html
52377fac393e305eb833e259a802d796 *html/Pedigree.html
e28058997e2f6f98247dc0188054a087 *html/PennParam.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
064322400838432d08bebbf38ae55bad *html/TrioSet-class.html
c4079a51633e1849eb3169792f65b30d *html/TrioSet.html
58b7bf8cbb0184bfb471616f7dfa2717 *html/TrioSetList-class.html
51607b050729cefd9625245541709f04 *html/TrioSetList.html
aa3022d4a6dbbb4ba9f7674c07d1aaa7 *html/TrioSetListLD.html
61f55465202a84d08d75645b45284cbf *html/acf2.html
2874e7eb34246ab03be3d16c7b52b07a *html/calculateMindist.html
a2ece6985a4f5ef1d2d520078ce28fca *html/coercion-methods.html
20ea48b5b244641bf6f248a8d733db0e *html/denovo.html
f169e7ff648a9b541bcf7322252e31e9 *html/exampleTrioSetList.html
d66062bb6e9103d5932de29b778e5a44 *html/filterExperiment.html
d36ce43d4abfc18dc0ee76a4caabcfc1 *html/mad2.html
0b424a2e501aaad535a75b42519b2795 *html/mdLegend.html
dd23f2d5b7ae5e7460e6c03f00cf0118 *html/md_exp.html
40acc0f7d900627c57598733ecdf95a1 *html/md_gr.html
ef0d0ff7edf495043325d7c591df217d *html/mindist.html
3818f56e990155b7c1e8310448e9af5e *html/nMAD.html
9905bd1ef8de54a4a8d805652234f20a *html/pedigreeGrid.html
c0936be36fdc818ccc063e78f53e0cfb *html/pedigreeName.html
5cee7f74443216cdace049d90c4cbaa2 *html/pedigreeViewports.html
a3b816d0d81674e359d0504f8428f8c7 *html/plotDenovo.html
b4bb9f54d2639c4e506a87277713d532 *html/range-ILimit-method.html
31486dbcb1944f64915f6badfe577f04 *html/segment2.html
8b1703686f0ca0a0e7b3e9e9ff381eaa *scripts/Affy2.R
15ff3c916756840de8888648ce5db0ed *scripts/Discordance.Rnw
de1aeda81e8c8ab6ded25df5ae2dbfab *scripts/Sweave.sty
a099ccea8ee43f05d160bcd257bb7afd *scripts/affy.R
3f33c8b63c426893a035c8f308a28ff5 *scripts/cleft_notParallel.Rnw
7e24f8634a31c17e346eb2286684ad37 *scripts/logR.baf.rda
ba7dfa59e03a85041de313b351b0f3c7 *scripts/runDiscordance.R
599722eeff0f922065ccf8d80b4adf35 *unitTests/Makefile
68b329da9893e34099c7d8ad5cb9c940 *unitTests/test_FilterParam.R
77e62a5014e356ab9d18448b2c0b384d *unitTests/test_MinDistExperiment.R
f1475ea1d62c4ffd452d99f92cd8350b *unitTests/test_Pedigree-class.R
781a05f56baa5e0dd8ec83790c5df78a *unitTests/test_PedigreeViews.R
77dfc64a92be3f977d0c916f43b20229 *unitTests/test_SnpArrayExperiment.R
e06a2b41fe11be4b705479117744ee1f *unitTests/test_TrioSetList.R
dc3c4b8f7bb58771e718df5fdc795973 *unitTests/test_calculateMindist.R
4540f66b68b46c13b9b426fe03cd204e *unitTests/test_callDenovoSegments.R
4587128861c0c33e9b8214229b5235a2 *unitTests/test_few_markers.R
54c90f7f2879fcebc2e5b990619711f6 *unitTests/test_posteriorCalls.R
f5137971c91537a9bb77435fff628537 *unitTests/test_quads.R
68b329da9893e34099c7d8ad5cb9c940 *unitTests/test_rdsViews.R
2d2179773cc4e441499d731ccba69f3c *unitTests/test_splitsForCBS.R
