Preprocess_CancerSite_Methylation450k {MethylMix} | R Documentation

## The Preprocess_CancerSite_Methylation450k function

### Description

Internal. Pre-processes DNA methylation data from TCGA from Illymina 450k arrays.

### Usage

    Preprocess_CancerSite_Methylation450k(CancerSite, METdirectory,
      MissingValueThreshold = 0.2)

### Arguments

`CancerSite` | character of length 1 with TCGA cancer code.
`METdirectory` | character with directory where a folder for downloaded files will be created. Can be the object returned by the Download_DNAmethylation function.
`MissingValueThreshold` | threshold for removing samples or genes with missing values.

### Value

List with pre processed methylation data for cancer and normal samples.

[Package MethylMix version 2.10.2 Index]