MBttest-package {MBttest} | R Documentation

## Multiple Beta t-tests

### Description

This package is used to peform multiple beta t-test analyses of real data and gives heatmap of differential expressions of genes or differential splicings. The results listing geneid or isoformid, gene name, the other information, t-value, p-value, adjusted p-value, adjusted alpha value, rho, and symb are saved in csv file.

### Details

Package: | MBttest
Type: | Package
Version: | 1.0
Date: | 2015-01-02
License: | GPL-3

### Author(s)

Yuan-De Tan

Maintainer: Yuan-De Tan tanyuande@gmail.com

### References

Baggerly KA, Deng L, Morris JS, Aldaz CM (2003) Differential expression in SAGE: accounting for normal between-library variation. Bioinformatics, 19: 1477-1483.
Yuan-De Tan Anita M. Chandler, Arindam Chaudhury, and Joel R. Neilson(2015) A Powerful Statistical Approach for Large-scale Differential Transcription Analysis.Plos One,10.1371/journal.pone.0123658.

### See Also

`betaparametab`, `betaparametVP`, `betaparametw`, `betattest`, `mbetattest`, `maplot`, `myheatmap`, `oddratio`, `pratio`, `simulat`, `smbetattest`, `mtprocedure`, `mtpvadjust`

### Examples

    data(jkttcell)
    mbetattest(X=jkttcell[1:500,],na=3,nb=3,W=1,alpha=0.05,file="jurkat_NS_48h_tag_mbetattest.csv")

[Package MBttest version 1.8.1 Index]