7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
333c40405cd6c263edbc2862ea17dfd1 *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
62fb518a56b80453fff26e453f158e50 *Meta/Rd.rds
29f6edf1b04b7ccdf21854fab7d15626 *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
9a81a40559b7e7e51244f015539ce784 *Meta/hsearch.rds
a6760d5762e0c5ed6a9c8db12cfbf44d *Meta/links.rds
6652fa5ebd4624df84d3b8fc428f2f53 *Meta/nsInfo.rds
594269a1bb01bfb51d8d398ca7d4a278 *Meta/package.rds
ce4ac5c11379fd2aab78e9e85762ada1 *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/MADSEQ
dbb8ce461cb266c5bc45fc9be5db08e3 *R/MADSEQ.rdb
9c4836d2934852bd7862e28e45ebfcb5 *R/MADSEQ.rdx
e7fc299e5ebbd0643784b7cf06a00fd5 *data/Rdata.rdb
901db4039d7be09a6c92196f3405c614 *data/Rdata.rds
7743182da8ff88b4193c663f23de440c *data/Rdata.rdx
c8b39fb1864574e045aecb513d6d1f5f *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
9b2c1ad9fbb7607afaf03648d8859abe *doc/MADSEQ-vignette.html
8d2a12cbcba7e2d17c0a7f5e2ce7d491 *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
21c7ea3625834e63ba3bda83b8ef8fe6 *help/MADSEQ.rdb
28a1419e0e74d7f252b1dfef66b26376 *help/MADSEQ.rdx
c7207bfd2fcb91e56b3f8307448ec96b *help/aliases.rds
8c1fd5c901bc881a739647bdb8b2d636 *help/paths.rds
900906c34791ec96dff7ecc87a7ffb30 *html/00Index.html
67e99d7b6d40dd27f5cd019cb932a0e2 *html/MADSEQ-package.html
a54cbc0b4a45ec96b74b89699f2e5756 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
bcb38db52f0b8a45b3e9de792ac3cf07 *html/aneuploidy_chr18.html
0ba153436aff833b77da15936902188f *html/deltaBIC.html
88cf362e204ad7d1de07eb61e764c1cc *html/normalizeCoverage.html
d8508559647cc4be47a6d15340cac469 *html/plotFraction.html
3f446f2d480d31c5e9c93965502f1934 *html/plotMadSeq.html
ff30c2e85fe3b21319d659871cc2145e *html/plotMixture.html
f4cf251422a47042aa617419dd2ff91f *html/posterior.html
a2a86ad2099ecf5809d14a2e26d2aa58 *html/prepareCoverageGC.html
ac6c08e3a787380ace60912507a26e2d *html/prepareHetero.html
3074071b2fe615e19a9d1af42697e819 *html/runMadSeq.html
007896b0778aea06f83c05e11dfbbe0f *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
