parseKGML {KEGGgraph} | R Documentation

## KGML file parser

### Description

The function parses KGML files according to the KGML XML documentation.

### Usage

    parseKGML(file)

### Arguments

`file` | Name of KGML file

### Details

The function parses KGML file (depending on XML package).

### Value

An object of `KEGGPathway-class`.

### Author(s)

Jitao David Zhang mailto:jitao_david.zhang@roche.com

### References

KGML Manual http://www.genome.jp/kegg/docs/xml/

### See Also

`parseEntry`, `parseRelation`, `parseReaction`, `KEGGPathway-class`,

### Examples

    sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
    kegg.pathway <- parseKGML(sfile)
    kegg.pathway

[Package KEGGgraph version 1.40.0 Index]