get_interactions {IrisSpatialFeatures} | R Documentation

## Get interactions for a specific marker

### Description

Get interactions for a specific marker

### Usage

    get_interactions(x, ...)

    ## S4 method for signature 'ImageSet'
    get_interactions(x, marker, normalize = TRUE)

### Arguments

`x` | An IrisSpatialFeatures ImageSet object
`...` | Additional arguments.
`marker` | Cell-type for which the interactions should be pulled
`normalize` | Flag to indicated whether to normalize each sample so all interactions sum up to 1 (Default: 1)

### Value

interactions for a specific marker

### Examples

    #' #loading pre-read dataset
    dataset <- IrisSpatialFeatures_data
    dataset <- extract_interactions(dataset)
    get_interactions(dataset,'CD8+ PD1+')

[Package IrisSpatialFeatures version 1.3.0 Index]