Package: IrisSpatialFeatures
Type: Package
Title: A package to extract spatial features based on multiplex IF
        images
Version: 1.3.0
Date: 2017-10-11
Author: Daniel Gusenleitner, Jason L. Weirather
Maintainer: Daniel Gusenleitner <Daniel_Gusenleitner@dfci.harvard.edu>
Depends: R (>= 3.4)
Imports: Rcpp (>= 0.12.7), SpatialTools, gplots, spatstat, tiff,
        RColorBrewer, methods, grDevices, graphics, stats, utils,
        data.table, ggplot2, dplyr, magrittr, tibble
Description: IrisSpatialFeatures reads the output of the PerkinElmer inForm software and
    calculates a variety of spatial statistics. In addition to simple 
    counts, it can derive average nearest neighbors for each cell-type and 
    interaction summary profiles for each celltype. These statistics are 
    derived across images, both overall and regions of interest as defined 
    by user defined masks.
License: MIT + file LICENSE
LinkingTo: Rcpp
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 6.0.1
Suggests: knitr, rmarkdown, testthat
biocViews: FeatureExtraction, SingleCell
NeedsCompilation: yes
Packaged: 2018-01-31 03:32:38 UTC; biocbuild
Built: R 3.5.0; i386-w64-mingw32; 2018-01-31 06:51:42 UTC; windows
Archs: i386, x64
