overview_plot {IrisSpatialFeatures} | R Documentation

## Plot all coordinates in a given dataset

### Description

Plot all coordinates in a given dataset

### Usage

    overview_plot(x, ...)

    ## S4 method for signature 'ImageSet'
    overview_plot(x, outdir = "./", palette = NULL,
      type = "pdf", width = 10, height = 7)

### Arguments

`x` | Sample ImageSet object of the IrisSpatialFeatures package.
`...` | Additional arguments
`outdir` | Output directory (default: './')
`palette` | Color palette used for the different cell-types. (default: NULL)
`type` | File format for the plots. Can bei either 'pdf' or 'png'. (default: 'pdf')
`width` | Width of the plot in inches for pdf and pixels for png. (default: 10)
`height` | Heigth of the plot in inches for pdf and pixels for png. (default: 7)

### Value

plot of all coordinates

### Examples

    #loading pre-read dataset
    dataset <- IrisSpatialFeatures_data
    overview_plot(dataset)

[Package IrisSpatialFeatures version 1.3.0 Index]