hlaAttrBagClass {HIBAG} | R Documentation

## The class of HIBAG model

### Description

The class of a HIBAG model, and its instance is returned from `hlaAttrBagging`.

### Value

Return a list of:

`n.samp` | the total number of training samples
`n.snp` | the total number of candidate SNP predictors
`sample.id` | the sample IDs
`snp.id` | the SNP IDs
`snp.position` | SNP position in basepair
`snp.allele` | a vector of characters with the format of “A allele/B allele”
`snp.allele.freq` | the allele frequencies
`hla.locus` | the name of HLA locus
`hla.allele` | the HLA alleles used in the model
`hla.freq` | the HLA allele frequencies
`assembly` | the human genome reference, such like "hg19"
`model` | internal use
`appendix` | an optional list: `platform` – supported platform(s); `information` – other information, like training sets, authors; `warning` – any warning message
`matching` | matching proportion in the training set

### Author(s)

Xiuwen Zheng

### See Also

`hlaAttrBagging`, `hlaParallelAttrBagging`, `hlaAttrBagObj`

[Package HIBAG version 1.16.0 Index]