d9ff7ec1a74a0fe5b5bc6725a16a5354 *DESCRIPTION
6c1d9521ed8c4849661b87dc9e098636 *INDEX
1deb945a3f06554d881c32c6b8710e8a *Meta/Rd.rds
cfc23eaf56d9db5db75e5ea02af0121c *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
93ac82aa69ad4a4fcb66165daa085252 *Meta/hsearch.rds
6d94182cd7454551a9a6a4407da02851 *Meta/links.rds
b89df5b4e0b7d9e61d3d59e0df91252f *Meta/nsInfo.rds
c70c298193c93506fb17e2f9949afe79 *Meta/package.rds
13527ad6e6d6619f97e1365c5f3ff469 *Meta/vignette.rds
12623801abce9e26615688a7b1117a4b *NAMESPACE
72ecd186ff9413b48ea2929bb815ed34 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GenomicInteractions
7abdc65d142b44a620adfc7503d37952 *R/GenomicInteractions.rdb
9a792d097e6e734f718691d52c77d7af *R/GenomicInteractions.rdx
398558e5248b1a617c42f5fe6c1ad024 *data/hg19.refseq.transcripts.rda
d976d748baf9338534b53095b4433f0f *data/hic_example_data.rda
e738b2c892fd3a5023e8d0a9cc9dc787 *data/mm9_refseq_promoters.rda
f3be44c2045c0287f3e042d3e80a710b *data/thymus_enhancers.rda
51301553b7a4b5c297cfc3d0af8b9020 *doc/chiapet_vignette.R
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1aec73444f76ab4e96307fc29f591682 *doc/chiapet_vignette.rmd
721da4415671f7430deb17fbdd98c104 *doc/hic_vignette.R
c0f756d66f273869519f0c22efc34230 *doc/hic_vignette.Rmd
5608c3d8adffcf498834567a2706ef8a *doc/hic_vignette.html
9597385754aedab651758fc993b6d01e *doc/index.html
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adc8c65e7510394df1e46053c58796db *extdata/k562.rep1.cluster.pet3+.txt
8438c331772396c12ca39a1657a5baff *help/AnIndex
6086f95694d90135a89e612201261a41 *help/GenomicInteractions.rdb
42cdab34afd24648f06944061d04576e *help/GenomicInteractions.rdx
a2a11b8038ed1f6a397a4e1aaa73341a *help/aliases.rds
ff1a5931e7eeeb74ea306012d9116aac *help/paths.rds
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3985880aac57fc0a1341c009333a678b *html/GInteractions-subsetByFeatures-methods.html
3d140df1f7d52799ceea97e78595cbe6 *html/GenomicInteractions-class.html
7cd7f47d67f2f8035139b256dacdb3fe *html/GenomicInteractions-package.html
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214db7ec50da8f361d112dff4c973afc *html/InteractionTrack-class.html
432e97d48797dbf90887707681b26082 *html/InteractionTrack.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
3ac3242bb9a3107d9365066ac26788e4 *html/annotateInteractions.html
da63aacce7d5b6038761597ddd8d9f7b *html/annotateRegions.html
fa1833e31c18f7a7fd2ca35260422710 *html/asBED-GInteractions-method.html
56ec226a912b973f3369abef16f91c5e *html/availableDisplayPars.html
7341f71a4adc66917127370c125a2d1c *html/calculateDistances.html
0dbc9f51cca287ac93d34b37504ec0f7 *html/categoriseInteractions.html
4d0d790590dbd2c73c1055b6ebf5e643 *html/countsBetweenAnchors-methods.html
be43056a795801712b8268032afc2744 *html/export.bed12.html
4bcd24bfbd1d62a1adf9b10401de6cb3 *html/export.bedpe.html
26041786e7a59cc4daf304fd6d448251 *html/export.chiasig.html
5949678250739a8e7a5a4375bedceaad *html/export.igraph.html
6cf2718b62c8c57de6ac4f3e8b829dd0 *html/get_binom_ligation_threshold.html
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1f7278892d43400c262dee6e65c08fdb *html/getters.html
03a9db84105b372d918d1d5176025133 *html/hg19.refseq.transcripts.html
92558ae7fd702c8ba85149509a405aaf *html/hic_example_data.html
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203c82a43bcd8efcaf213abac41c1f66 *html/plotAvgViewpoint.html
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761e83c6723f70f64498db0f9412f4f1 *html/plotCounts.html
74a0ab949eedf3c3ec57a4334159b6f0 *html/plotDists.html
644254793892d8f7f9a0d6d1d5c202f3 *html/plotInteractionAnnotations.html
bdd389a3f981990c66c6e4455ce764b3 *html/plotSummaryStats.html
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e7ff77f3c8d7dec4621cfb8e823ca6c1 *html/removeDups.html
22ea7d2654468be7368e4877fbe1951b *html/resetAnnotations.html
c9bf6d6e99c92457be814051615a6df5 *html/sameStrand.html
d7664ffc4610342e22769594fe1ba6e0 *html/setters.html
43ce7c0dd4ebddaae8c166236199e62b *html/sum-GInteractions-method.html
3938b93aa1a22ee678a1d256810bc170 *html/summariseByFeaturePairs.html
789a45b8ed0214186b457cbac9a12138 *html/summariseByFeatures.html
c242677115d72330e2226201fa38b1e2 *html/thymus_enh.html
5db02b19d18c36d578f50833de12904f *html/updateObject-GenomicInteractions-method.html
de33e87606b8e66d37f8de7cf982630f *html/viewPoint.html
