view {GenoGAM} | R Documentation

## View the dataset

### Description

Cbinding the columns all together and coercing to data.frame

### Usage

    view(object, ...)

    ## S4 method for signature 'GenomicTiles'
    view(object, ranges = NULL, seqnames = NULL,
      start = NULL, end = NULL)

### Arguments

`object` | A `GenomicTiles` object
`...` | Additional arguments
`ranges` | A `GRanges` object. Makes it possible to select regions by `GRanges`. Either ranges or seqnames, start and end must be supplied
`seqnames` | A chromosomes name. Either ranges or seqnames, start and end must be supplied
`start` | A start site. Either ranges or seqnames, start and end must be supplied
`end` | An end site. Either ranges or seqnames, start and end must be supplied

### Value

A data.frame of the selected data.

### Author(s)

Georg Stricker georg.stricker@in.tum.de

### Examples

    gt <- makeTestGenomicTiles()
    gr <- GRanges(c("chrI", "chrII"), IRanges(c(1, 10), c(40, 30)))
    head(view(gt, ranges = gr))
    head(view(gt, seqnames = "chrI", start = 1, end = 20))

[Package GenoGAM version 1.8.0 Index]