Package: DropletUtils
Version: 1.0.3
Date: 2018-08-07
Title: Utilities for Handling Single-Cell Droplet Data
Authors@R: c(person("Aaron", "Lun", role = c("aut", "cre"), 
    email = "alun@wehi.edu.au"), person("Jonathan",
    "Griffiths", role="ctb"), person("Davis", "McCarthy",
    role="ctb"))
Maintainer: Aaron Lun <alun@wehi.edu.au>
Depends: R (>= 3.5), BiocParallel, SingleCellExperiment
Imports: S4Vectors, Matrix, methods, utils, stats, edgeR, Rcpp, rhdf5
Suggests: testthat, beachmat, knitr, BiocStyle, rmarkdown, HDF5Array
biocViews: SingleCell, Sequencing, RNASeq, GeneExpression,
        Transcriptomics, DataImport, Coverage
Description: Provides a number of utility functions for handling 
    single-cell (RNA-seq) data from droplet technologies such as 10X
    Genomics. This includes data loading, identification of cells from 
    empty droplets, removal of barcode-swapped pseudo-cells, and 
    downsampling of the count matrix.
License: GPL-3
NeedsCompilation: yes
VignetteBuilder: knitr
LinkingTo: Rcpp, beachmat, Rhdf5lib
SystemRequirements: C++11
RoxygenNote: 6.0.1
git_url: https://git.bioconductor.org/packages/DropletUtils
git_branch: RELEASE_3_7
git_last_commit: 076f4fa
git_last_commit_date: 2018-08-07
Date/Publication: 2018-08-07
Packaged: 2018-08-08 03:51:51 UTC; biocbuild
Author: Aaron Lun [aut, cre],
  Jonathan Griffiths [ctb],
  Davis McCarthy [ctb]
Built: R 3.5.1; i386-w64-mingw32; 2018-08-08 09:59:01 UTC; windows
Archs: i386, x64
