sdp.plot {DOQTL} | R Documentation

## Plot association mapping results.

### Description

Plot the founder strain distribution patterns (SDP) of the SNPs in results.

### Usage

      sdp.plot(results, ...)

### Arguments

`results` | Data.frame containing output from `assoc.map`.
`...` | Additional arguments passed to plot.

### Details

Given the output from `assoc.map`, plot the SDPs for the SNPs in results. This will show which strains have the minor allele at each SNP in results. You may also add this plot to the top of `assoc.plot`.

### Value

Produces a plot. There is no return value.

### Author(s)

Daniel Gatti

### See Also

`assoc.map`, `assoc.plot`

### Examples

      ## Not run:
        results = assoc.map(pheno = pheno, pheno.col = 1, probs = probs, K = K, addcovar = addcovar,
    	snps = snps, chr = 1, start = 40, end = 45)
        sdp.plot(results[results[,12] > 3,])

    ## End(Not run)

[Package DOQTL version 1.16.2 Index]