example.pheno {DOQTL} | R Documentation

## Example phenotypes.

### Description

Example phenotypes.

### Usage

     example.pheno

### Format

A data frame with 149 observations on the following 8 variables. Sample IDs in rownames and phenotype names in colnames.

`Sample`

  Character vector containing sample IDs.

`Sex`

  Character vector containing the sex of each animal.

`Gen`

  Character vector containing DO outbreeding generation and litter.

`Diet`

  Character vector containing diet, either chow or hf for high fat.

`Coat.Color`

  Character vector containing text description of mouse colors.

`albino`

  Numeric vector contining 1 if the mouse's coat color was white.

`black`

  Numeric vector contining 1 if the mouse's coat color was black.

`HDLD2`

  Numeric vector of high density lipoprotein values.

### Details

Data from Svenson et.al. paper below.

### References

High-resolution genetic mapping using the Mouse Diversity outbred population. Svenson KL, Gatti DM, Valdar W, Welsh CE, Cheng R, Chesler EJ, Palmer AA, McMillan L, Churchill GA. Genetics. 2012 FALSEeb;190(2):437-47 PMID: 223445611

### Examples

      head(example.pheno)

[Package DOQTL version 1.16.2 Index]