get.strains {DOQTL} | R Documentation

## get.strains

### Description

Get available strain names for a set of strains from a variant file.

### Usage

      get.strains(
      file = "http://cgd.jax.org/tools/SNPtools/Build38/sanger.snps.NCBI38.txt.gz")

### Arguments

`file` | Character, full path to the variants file to use. Default is the file at the Center for Genome Dynamics at The Jackson Laboratory.

### Value

Character vector of strain names in the variant file.

### Author(s)

Daniel Gatti

### Examples

      ## Not run:
      available.strains = get.strains()
      strains = available.strains[c(2, 5, 8, 9, 13:15, 17)]
      snps = get.variants(chr = 7, start = 103, end = 105, strains = strains)

    ## End(Not run)

[Package DOQTL version 1.16.2 Index]