DESeqTransform-class {DESeq2} | R Documentation

## DESeqTransform object and constructor

### Description

This constructor function would not typically be used by "end users". This simple class extends the RangedSummarizedExperiment class of the SummarizedExperiment package. It is used by `rlog` and `varianceStabilizingTransformation` to wrap up the results into a class for downstream methods, such as `plotPCA`.

### Usage

    DESeqTransform(SummarizedExperiment)

### Arguments

`SummarizedExperiment` | a RangedSummarizedExperiment

### Value

a DESeqTransform object

[Package DESeq2 version 1.20.0 Index]