plotSmoothPatterns {CoGAPS} | R Documentation

## Plot Smooth Patterns

### Description

Plot Smooth Patterns

### Usage

    plotSmoothPatterns(P, x = NULL, breaks = NULL, breakStyle = TRUE,
      orderP = !all(is.null(x)), plotPTS = FALSE, pointCol = "black",
      lineCol = "grey", add = FALSE, ...)

### Arguments

`P` | the mean A matrix
`x` | optional variables
`breaks` | breaks in plots
`breakStyle` | style of breaks
`orderP` | whether to order patterns
`plotPTS` | whether to plot points on lines
`pointCol` | color of points
`lineCol` | color of line
`add` | logical specifying if bars should be added to an already existing plot; defaults to ‘FALSE’.
`...` | arguments to be passed to/from other methods. For the default method these can include further arguments (such as ‘axes’, ‘asp’ and ‘main’) and graphical parameters (see ‘par’) which are passed to ‘plot.window()’, ‘title()’ and ‘axis’.

### Details

plots the output A and P matrices as a heatmap and a line plot respectively

### Value

plot

[Package CoGAPS version 3.0.2 Index]