tf2ugFC {CoGAPS} | R Documentation

## Gene sets defined by transcription factors defined from TRANSFAC.

### Description

List of genes contained in gastrointestinal stromal tumor cell line measurements that are regulated by transcription factors in the TRANSFAC database. Used for the gene set analysis in Ochs et al. (2009).

### Usage

    TFGSList

### Format

Data.frame containing genes (rows) regulated by each transcription factor (columns).

### References

Ochs, M., Rink, L., Tarn, C., Mburu, S., Taguchi, T., Eisenberg, B., and Godwin, A. (2009). Detection of treatment-induced changes in signaling pathways in gastrointestinal stromal tumors using transcriptomic data. Cancer Res, 69(23), 9125-9132.

[Package CoGAPS version 3.0.2 Index]