ora_data {CEMiTool} | R Documentation

## Retrieve over representation analysis (ORA) results

### Description

Retrieve over representation analysis (ORA) results

### Usage

    ora_data(cem)

    ## S4 method for signature 'CEMiTool'
    ora_data(cem)

### Arguments

`cem` | Object of class `CEMiTool`

### Value

Object of class `data.frame` with ORA data

### Examples

    # Get example CEMiTool object
    data(cem)
    # Read gmt file
    gmt <- read_gmt(system.file('extdata', 'pathways.gmt',
                       package='CEMiTool'))
    # Run module overrepresentation analysis
    cem <- mod_ora(cem, gmt)
    # Check results
    head(ora_data(cem))

[Package CEMiTool version 1.4.2 Index]