reporter {Biobase} | R Documentation

## Example data.frame representing reporter information

### Description

The `reporter` object is a 500 by 1 data frame. The rows represent the 500 probe IDs in the `geneData` data. The values in `reporter` are the predefined probe types for the probes. `reporter` is used in conjunction with the `geneData` object and its associates.

### Usage

    data(reporter)

### Format

A 500 by 1 data frame

### Details

There are 10 predefined probe types:

- `AFFX-` Quality Control (QC)

- `_f_` SequenceFamily

- `_g_` CommonGroups

- `_s_` SimilarityConstraint

- `_r_` RulesDropped

- `_i_` Incomplete

- `_b_` AmbiguousProbeSet

- `_l_` LongProbeSet

- `_at` AntiSenseTarget

- `_st` SenseTarget

### Source

Affymetrix GeneChip Expression Analysis Data Analysis Fundamentals (http://www.affymetrix.com/Auth/support/downloads/manuals/data_analysis_fundamentals_manual.pdf)

### Examples

    data(reporter)
    ## maybe str(reporter) ; plot(reporter) ...

[Package Biobase version 2.40.0 Index]