6ea31ed48d80d3c72ecfaa73ef11ddec *DESCRIPTION
91d413d5150ec06f174978545498270d *INDEX
af5d2e67d4cb61b376aa634954c4c55d *Meta/Rd.rds
4947162492a2042eb2b02416e9118b82 *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
5c6e10d231defb982dc0124a78dc7939 *Meta/hsearch.rds
0bbbb6c104b152604dec01719227decd *Meta/links.rds
0ff44bd11129385dd0db8fea5d7c25ed *Meta/nsInfo.rds
2c9efeaf7e0d5e0369d400b87cafa472 *Meta/package.rds
403f6203237f8d845d10cb692efbfeab *Meta/vignette.rds
ae59b8a6e95d660b2b63a851c68911a9 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/Basic4Cseq
83d5a9e33df4b3a4e67e0cba2cc040cd *R/Basic4Cseq.rdb
74fffe7c78751e7e01edc476c673bdf1 *R/Basic4Cseq.rdx
371a0994c3f3c2931aed600ac0183fde *data/liverData.RData
ba5c985bdae524e41b9b8a24d0cebb38 *data/liverDataRaw.RData
cb12cab230a19f7373dab080cd9dfade *doc/index.html
0cded5c665295c5748d19bad3ffdd592 *doc/vignette.R
67392a702c2453b846903e0c1a42e6c0 *doc/vignette.Rnw
d5c023ba645ca2d0a1ba6d4ec852582a *doc/vignette.pdf
b90cc5bc0dca1138debae1179cb813f8 *extdata/RCircos_GRCm38_ideogram.csv
6cbaecaf4ed2293298343bfce751c258 *extdata/RCircos_HG19_ideogram.csv
00c1d1d92fa3a07f3403a5c039f899c7 *extdata/enzymeData.csv
6332710cc1a1ee8ef40cb95538a94929 *extdata/fetalLiverCutter.sam
4f671ebe3f1c6dc00177f7d50b8944df *extdata/fetalLiverShort.bam
614b15a01e9f8d0bd62458ec969845c7 *extdata/fetalLiverVP.bed
ab13942a15e17712f182b3b1c1e0363a *extdata/fetalLiver_finalFragments.csv
a3e529247e47214266dd2a252dfb039b *extdata/transInteractionData.txt
d39a2c0c80702059da9c6f99ae18a212 *extdata/veryShortExample.fastq
a80e603e40f7343b0bb97c1380df61c8 *extdata/veryShortLib.csv
e9e6b8add27c84f481a1839f9db793d1 *extdata/veryShortReference.fasta
ac34dfc4f22e37a2a286f31ddf7ecceb *extdata/veryShortReference.fasta.amb
06d4a319a43ef8e7bf7f0090e14e6433 *extdata/veryShortReference.fasta.ann
88c3629f9b4134224e100e04d1fcc251 *extdata/veryShortReference.fasta.bwt
cfc9149681143ca9aff12fe0842e34d1 *extdata/veryShortReference.fasta.pac
3748a2acac76bf91845f10bd7df8dabb *extdata/veryShortReference.fasta.sa
e914f0f7d046dc7494eeb2e2d3348ed2 *extdata/vfl_aagctt_catg_mm9_54_vp.csv
cb8113f292b6668dd86d61425d18203a *help/AnIndex
eb58e2e08d5b5c821d2a46c91e19b6e6 *help/Basic4Cseq.rdb
af85793f0fd3d238c6f655b02d79307f *help/Basic4Cseq.rdx
991084393b124160ce47ae938402cdb4 *help/aliases.rds
a1db5ad2b80849c071adb4c56d182a9e *help/paths.rds
e2387a404890d916c6ff4ee60d58d3dd *html/00Index.html
b7e0935e9b9ce98788dcd6a23dbf35e2 *html/Data4Cseq-class.html
2bcc42ecc81b33e0003607572f16ab4e *html/Data4Cseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
2b0eab6b73571f6e6bc866e5ded82eeb *html/checkRestrictionEnzymeSequence.html
ed4b2282e73cfc4b9fcf7900bdba3345 *html/chooseNearCisFragments.html
a577d6dd7bdd4bfc0bd722a6a5058748 *html/createVirtualFragmentLibrary.html
2cc59da9b31c98a8008145c3818f8db1 *html/drawDigestionFragmentHistogram.html
c5a296b658caf33af775f098fa5ec6ed *html/drawHeatmap.html
a2c4026ea24105ec8b4fba0983be9e97 *html/exportVisualizationFragmentData.html
cc394f28e4520458236f998bbbbfd9da *html/getReadDistribution.html
bceffa21a613f538bd03564be72fa8d5 *html/giveEnzymeSequence.html
001e1321848acdf89cbab8b629fc1301 *html/importVisualizationFragmentData.html
d76e2d77ad9a3f77d3af5869233a8ad1 *html/liverData.html
937472d4f3ea7bc90bb0da9a06eca2d2 *html/liverDataRaw.html
10b54cd80722ebcb78089447c6b5b6a4 *html/normalizeFragmentData.html
c72fd38ce05fd5c541a5351d9726d597 *html/plotTransInteractions.html
c148d8b843de398c7a762dfe98002031 *html/prepare4CseqData.html
4e2a2d1e1e73ad787f2cbacc77325856 *html/printBEDFragmentLibrary.html
15b81841abad4f217947814c260b30d5 *html/printWigFile.html
88adc5352ab2957633c6d31d5c298048 *html/readPointsOfInterestFile.html
cdcd81b33b666b2bf36e14ec61f2de38 *html/readsToFragments.html
b6c087e5decdb85d5407fda5247e83a9 *html/simulateDigestion.html
04379e7f239cbe02163205aa292e1852 *html/visualizeViewpoint.html
