DM                      Compute the distance-to-median statistic
buildSNNGraph           Build a SNN graph
combineVar              Combine variance decompositions
computeSpikeFactors     Normalization with spike-in counts
computeSumFactors       Normalization by deconvolution
convertTo               Convert to other classes
correlatePairs          Test for significant correlations
cyclone                 Cell cycle phase classification
decomposeVar            Decompose the gene-level variance
denoisePCA              Denoise expression with PCA
exploreData             Shiny app for explorative data analysis
findMarkers             Find marker genes
improvedCV2             Stably model the technical coefficient of
                        variation
mnnCorrect              Mutual nearest neighbors correction
overlapExprs            Overlap expression profiles
quickCluster            Quick clustering of cells
sandbag                 Cell cycle phase training
selectorPlot            Construct a selector plot via Shiny
technicalCV2            Model the technical coefficient of variation
testVar                 Test for significantly large variances
trendVar                Fit a variance trend
