# Generated by roxygen2 (4.1.1): do not edit by hand

export(calculatePvalue)
export(motifbreakR)
export(plotMB)
export(snps.from.file)
export(snps.from.rsid)
import(BiocGenerics)
import(BiocParallel)
import(GenomeInfoDb)
import(GenomicRanges)
import(IRanges)
import(S4Vectors)
import(grDevices)
import(methods)
import(motifStack)
importFrom(BSgenome,snpid2grange)
importFrom(BSgenome,snplocs)
importFrom(BiocParallel,bplapply)
importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,IUPAC_CODE_MAP)
importFrom(Biostrings,complement)
importFrom(Biostrings,getSeq)
importFrom(Biostrings,replaceLetterAt)
importFrom(Biostrings,reverseComplement)
importFrom(Gviz,AnnotationTrack)
importFrom(Gviz,GenomeAxisTrack)
importFrom(Gviz,HighlightTrack)
importFrom(Gviz,IdeogramTrack)
importFrom(Gviz,SequenceTrack)
importFrom(Gviz,plotTracks)
importFrom(TFMPvalue,TFMpv2sc)
importFrom(TFMPvalue,TFMsc2pv)
importFrom(VariantAnnotation,readVcf)
importFrom(compiler,cmpfun)
importFrom(grImport,PostScriptTrace)
importFrom(grImport,grid.picture)
importFrom(grImport,readPicture)
importFrom(matrixStats,colMaxs)
importFrom(matrixStats,colMins)
importFrom(matrixStats,colRanges)
importFrom(rtracklayer,import)
importFrom(stringr,str_extract)
importFrom(stringr,str_length)
importFrom(stringr,str_pad)
importFrom(stringr,str_replace)
importFrom(stringr,str_trim)
