Package: isomiRs
Version: 1.6.0
Date: 2017-08-24
Type: Package
Title: Analyze isomiRs and miRNAs from small RNA-seq
Description: Characterization of miRNAs and isomiRs, clustering and
   differential expression.
biocViews: miRNA, RNASeq, DifferentialExpression, Clustering
Suggests: knitr, RUnit, org.Mm.eg.db, cluster, clusterProfiler,
        pheatmap, BiocStyle, testthat
Depends: R (>= 3.4), DiscriMiner, SummarizedExperiment, TMB (>= 1.7.6),
        RcppEigen
Imports: BiocGenerics (>= 0.7.5), IRanges, S4Vectors, GenomicRanges,
        Biobase, DESeq2, reshape, tidyr, readr, dplyr, RColorBrewer,
        gplots, methods, ggplot2, gtools, gridExtra, grid, grDevices,
        graphics, stats, GGally, gamlss, lme4, gamlss.dist
LazyData: true
Authors@R: c(
    person("Lorena", "Pantano",
           email = "lorena.pantano@gmail.com",
           role = c("aut", "cre")),
    person("Georgia", "Escaramis", role = "aut"),
    person("Christos", "Argyropoulos",
    email = "cargyropoulos@unm.edu", role="aut"))
Maintainer: Lorena Pantano <lorena.pantano@gmail.com>
License: MIT + file LICENSE
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 6.0.1.9000
NeedsCompilation: yes
LinkingTo: TMB, RcppEigen
Packaged: 2017-10-31 01:38:15 UTC; biocbuild
Author: Lorena Pantano [aut, cre],
  Georgia Escaramis [aut],
  Christos Argyropoulos [aut]
Built: R 3.4.2; i386-w64-mingw32; 2017-10-31 05:45:26 UTC; windows
Archs: i386, x64
