GRangesToCoord          GRangesToCoord
H3K4me3                 H3K4me3 peak calls in a short region for six
                        adult tissues
LocalPeaks-class        LocalPeaks
NMI                     NMI
binarizePeaks           binarizePeaks
callBinary              callBinary
callSummary             callSummary
chromswitch             chromswitch: An R package for detecting
                        chromatin state switches
classEntropy            classEntropy
cluster                 cluster
clusterEntropy          clusterEntropy
completeness            completeness
conditionalClassEntropy
                        classEntropyGivenClusters
conditionalClusterEntropy
                        clusterEntropyGivenClasses
coordToGRanges          coordToGRanges
filterPeaks             filterPeaks
homogeneity             homogeneity
makeBrowserCoord        makeBrowserCoord
normalizePeaks          normalizePeaks
pReciprocalOverlap      pReciprocalOverlap
purity                  purity
readNarrowPeak          readNarrowPeak
reducePeaks             reducePeaks
retrievePeaks           retrievePeaks
summarizePeaks          summarizePeaks
vMeasure                vMeasure
winsorNorm              winsorNorm
